Daphnia magna (water flea): 116925175
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Entry
116925175 CDS
T07514
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116925175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116925175
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116925175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
116925175
NCBI-ProteinID:
XP_032787710
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Position
LG6:8702777..8706237
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AA seq
907 aa
AA seq
DB search
MTNTVDNRSFLDASRIFTGHRALGLVSNHIPLVTRYIPQRKETLIVTVIGNSYHTYGSNK
LNLLGVGIAHEDDITCLAGDNYRVYTASGHTIKVWKRSTELCNEFKGHEKTIHLMLPFGL
HLLAVDEANYLKVWDINAAEVNFELSFNPETFCISALIHPVTYINKILFGSTQGTMQLWN
LKTGKMVFAFNGWKSPITILEQAPAVDVVAVGLASGELILHNLKFDENLMKFKQEWGPIT
ALTFRTDGAPIMITGSSQGHLAIWDLEQQTLVQQHRYAHRGGVTGLKALTAEPIIITSSR
DNSLKMWIFDQSDGGVRLLRERGGHKAPPIRLRFHDQLGEWILSTGLDSSLRAFSTVADL
LHRNLGTAHYNQKKARRVGLEKAGPKMPPIITFASESVRDKEWDSIAAVHRRHSNVTTWS
FHRSTMGEHRLTHQRFVDNMALTKSSATCVTVTACGNFAIVGYDSGHIDRYNMQSGIHRA
TYLRPDTEKSSELPFTRNAVRGVASDGLNQVVLGVFANGQLNTWNFKSGEIVRETNLEVA
PSFTEINRHSGLLAIAMEDFSIAIVEVETGKIVRRLLGHDGRLTDLAFSPDARWVVSSAQ
DCSIRTWDLPTGTCIDYFLVPKSCVSITFSANGSFLATAHVDDLGIYLWNNQSLYTQVSL
RSLEADFQPKVAPLPGSTARSSCSEIEVSETMEEDEQFASPEQISDSLVTLSLLPDSRWK
NLLNLDAVKRRNRPKEPPKVQKLAPFFLTNTNSLEAIADSQKESVSRILESSSTPFAIPL
TPWAGKLNLAGKPEEYAGVIEELKTMGPSAIDTEIRSLSPHLGGSTHLLSQFLTSISVVL
ESKRNYEVVQAYLGLFLKVHASSLSEEHELCKRAENLSGVLKDSWSTLQSNFENTLCLVS
FFMNAVI
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacagttgacaatcgtagtttcttagatgcaagtcgcatattcactggacat
cgtgcattaggccttgttagcaatcacattcctttggttacaagatatattcctcaaagg
aaagagacgctcattgtaactgtcatcggaaactcttaccacacatatgggtcaaacaaa
ttaaacctgctgggtgttggaatagcacatgaagatgacatcacatgtcttgcaggtgac
aactatcgtgtatacacagccagtggtcatactatcaaagtctggaaaagaagcactgaa
ctttgcaatgagtttaaggggcatgaaaaaaccattcatctcatgttgccatttggtctt
catctacttgcagttgatgaagcaaattatcttaaagtttgggacataaatgcagcagaa
gtcaactttgagctcagtttcaatcctgaaaccttttgcatttcagcattgattcatcct
gtcacatacattaataaaattttatttggaagtacacaaggtacaatgcaattatggaac
ctgaaaactggtaaaatggtttttgcattcaatggatggaaaagcccaatcactatctta
gaacaagccccggctgtggatgttgtggctgttggacttgcgtcaggagagttgatattg
cacaacttgaaatttgatgaaaatttgatgaagtttaaacaagaatgggggccaattact
gctctgaccttcagaactgatggtgcccctattatgatcactggtagtagccagggtcat
cttgctatttgggaccttgaacagcaaaccctcgttcaacaacatcgatacgctcatcgt
ggaggtgtcacgggattgaaagctttaaccgcagagcccattataattacgtcatcccgt
gataattcgttaaaaatgtggatttttgaccagtcagacggtggtgtgcgattacttcgt
gagcgtggcggacataaggctccacccatccggttgagatttcacgaccagctgggcgaa
tggattctttcgactggattagattcctccctgcgagcattctcaaccgttgcagatctt
ctacatcgaaacttgggtactgcgcactataaccaaaagaaagctaggcgagtaggtcta
gaaaaggctggccctaaaatgccacccattattaccttcgcctcagagtcggttagagat
aaagaatgggattctatagcagctgtacatcgacgccattctaacgttacgacatggtcg
ttccacagatcaacaatgggcgaacacagactaacgcaccagcgctttgtagataatatg
gccttaactaaatcatctgcaacttgtgttactgttacggcgtgtggaaattttgcgatt
gtcggatatgattccggtcacatcgatcgttacaatatgcaatcaggaattcatcgtgcg
acatacctccgtccagatactgaaaaatcatcagaattgccatttacccgtaatgccgtt
cgaggggtggcatcagatggtcttaatcaggtagttttgggagtttttgctaatggtcag
ttaaacacgtggaacttcaagtctggagaaattgtgagagaaacaaacctcgaggtggct
cctagctttactgaaattaatagacacagtgggcttctggctatcgcaatggaagatttt
tcaattgccatcgtggaagtagagacgggcaaaattgttcgccggcttcttggacatgat
gggcggttaactgacttggcgttcagtccggatgctcgttgggtggtatcgtccgcccag
gactgtagtattcgaacctgggatctgcctactggaacgtgtatcgattattttcttgtt
ccgaagtcctgtgtttccattacctttagtgccaatggtagttttcttgctacagcacac
gtggacgatcttggcatttatttgtggaataatcagtcactatatacgcaagtgtctttg
cggtcactggaagcagatttccaacctaaagtggctccattaccaggatccactgcaagg
agtagctgttccgaaatcgaagttagtgaaacaatggaggaagacgaacagtttgcatct
ccggaacaaatttccgactctcttgtgactctttcattacttcctgattcaagatggaag
aatcttctgaatcttgatgctgtcaaacgacgcaacaggcctaaagagccaccaaaggtg
cagaaacttgctccttttttcctcacaaacaccaatagccttgaagcgatagcagacagc
cagaaagaatccgtttctcgcattttggaatcgtccagcaccccattcgcaataccctta
actccgtgggccggcaaacttaaccttgcagggaagccagaagaatatgcaggtgtcata
gaagagctcaaaacaatgggaccctcagccatcgataccgaaattcgttccctcagtcct
catctgggaggatcaacccatctgttgtcccagttcttaacttccatctctgtcgtactg
gaatctaagcgtaattatgaagtcgttcaagcctatttagggctttttttaaaggttcat
gctagttctttgagcgaagagcatgagttgtgtaaacgggcagaaaacttatcgggagtg
cttaaggacagctggtcaacgcttcaatcaaactttgagaatactctttgtttggtctca
ttctttatgaatgctgtcatctaa
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