KEGG   Daphnia magna (water flea): 116925175
Entry
116925175         CDS       T07514                                 
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116925175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dmk03009]
    116925175
Ribosome biogenesis [BR:dmk03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116925175
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR19_1st PEP5_VPS11_N WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 116925175
NCBI-ProteinID: XP_032787710
LinkDB
Position
LG6:8702777..8706237
AA seq 907 aa
MTNTVDNRSFLDASRIFTGHRALGLVSNHIPLVTRYIPQRKETLIVTVIGNSYHTYGSNK
LNLLGVGIAHEDDITCLAGDNYRVYTASGHTIKVWKRSTELCNEFKGHEKTIHLMLPFGL
HLLAVDEANYLKVWDINAAEVNFELSFNPETFCISALIHPVTYINKILFGSTQGTMQLWN
LKTGKMVFAFNGWKSPITILEQAPAVDVVAVGLASGELILHNLKFDENLMKFKQEWGPIT
ALTFRTDGAPIMITGSSQGHLAIWDLEQQTLVQQHRYAHRGGVTGLKALTAEPIIITSSR
DNSLKMWIFDQSDGGVRLLRERGGHKAPPIRLRFHDQLGEWILSTGLDSSLRAFSTVADL
LHRNLGTAHYNQKKARRVGLEKAGPKMPPIITFASESVRDKEWDSIAAVHRRHSNVTTWS
FHRSTMGEHRLTHQRFVDNMALTKSSATCVTVTACGNFAIVGYDSGHIDRYNMQSGIHRA
TYLRPDTEKSSELPFTRNAVRGVASDGLNQVVLGVFANGQLNTWNFKSGEIVRETNLEVA
PSFTEINRHSGLLAIAMEDFSIAIVEVETGKIVRRLLGHDGRLTDLAFSPDARWVVSSAQ
DCSIRTWDLPTGTCIDYFLVPKSCVSITFSANGSFLATAHVDDLGIYLWNNQSLYTQVSL
RSLEADFQPKVAPLPGSTARSSCSEIEVSETMEEDEQFASPEQISDSLVTLSLLPDSRWK
NLLNLDAVKRRNRPKEPPKVQKLAPFFLTNTNSLEAIADSQKESVSRILESSSTPFAIPL
TPWAGKLNLAGKPEEYAGVIEELKTMGPSAIDTEIRSLSPHLGGSTHLLSQFLTSISVVL
ESKRNYEVVQAYLGLFLKVHASSLSEEHELCKRAENLSGVLKDSWSTLQSNFENTLCLVS
FFMNAVI
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgacgaatacagttgacaatcgtagtttcttagatgcaagtcgcatattcactggacat
cgtgcattaggccttgttagcaatcacattcctttggttacaagatatattcctcaaagg
aaagagacgctcattgtaactgtcatcggaaactcttaccacacatatgggtcaaacaaa
ttaaacctgctgggtgttggaatagcacatgaagatgacatcacatgtcttgcaggtgac
aactatcgtgtatacacagccagtggtcatactatcaaagtctggaaaagaagcactgaa
ctttgcaatgagtttaaggggcatgaaaaaaccattcatctcatgttgccatttggtctt
catctacttgcagttgatgaagcaaattatcttaaagtttgggacataaatgcagcagaa
gtcaactttgagctcagtttcaatcctgaaaccttttgcatttcagcattgattcatcct
gtcacatacattaataaaattttatttggaagtacacaaggtacaatgcaattatggaac
ctgaaaactggtaaaatggtttttgcattcaatggatggaaaagcccaatcactatctta
gaacaagccccggctgtggatgttgtggctgttggacttgcgtcaggagagttgatattg
cacaacttgaaatttgatgaaaatttgatgaagtttaaacaagaatgggggccaattact
gctctgaccttcagaactgatggtgcccctattatgatcactggtagtagccagggtcat
cttgctatttgggaccttgaacagcaaaccctcgttcaacaacatcgatacgctcatcgt
ggaggtgtcacgggattgaaagctttaaccgcagagcccattataattacgtcatcccgt
gataattcgttaaaaatgtggatttttgaccagtcagacggtggtgtgcgattacttcgt
gagcgtggcggacataaggctccacccatccggttgagatttcacgaccagctgggcgaa
tggattctttcgactggattagattcctccctgcgagcattctcaaccgttgcagatctt
ctacatcgaaacttgggtactgcgcactataaccaaaagaaagctaggcgagtaggtcta
gaaaaggctggccctaaaatgccacccattattaccttcgcctcagagtcggttagagat
aaagaatgggattctatagcagctgtacatcgacgccattctaacgttacgacatggtcg
ttccacagatcaacaatgggcgaacacagactaacgcaccagcgctttgtagataatatg
gccttaactaaatcatctgcaacttgtgttactgttacggcgtgtggaaattttgcgatt
gtcggatatgattccggtcacatcgatcgttacaatatgcaatcaggaattcatcgtgcg
acatacctccgtccagatactgaaaaatcatcagaattgccatttacccgtaatgccgtt
cgaggggtggcatcagatggtcttaatcaggtagttttgggagtttttgctaatggtcag
ttaaacacgtggaacttcaagtctggagaaattgtgagagaaacaaacctcgaggtggct
cctagctttactgaaattaatagacacagtgggcttctggctatcgcaatggaagatttt
tcaattgccatcgtggaagtagagacgggcaaaattgttcgccggcttcttggacatgat
gggcggttaactgacttggcgttcagtccggatgctcgttgggtggtatcgtccgcccag
gactgtagtattcgaacctgggatctgcctactggaacgtgtatcgattattttcttgtt
ccgaagtcctgtgtttccattacctttagtgccaatggtagttttcttgctacagcacac
gtggacgatcttggcatttatttgtggaataatcagtcactatatacgcaagtgtctttg
cggtcactggaagcagatttccaacctaaagtggctccattaccaggatccactgcaagg
agtagctgttccgaaatcgaagttagtgaaacaatggaggaagacgaacagtttgcatct
ccggaacaaatttccgactctcttgtgactctttcattacttcctgattcaagatggaag
aatcttctgaatcttgatgctgtcaaacgacgcaacaggcctaaagagccaccaaaggtg
cagaaacttgctccttttttcctcacaaacaccaatagccttgaagcgatagcagacagc
cagaaagaatccgtttctcgcattttggaatcgtccagcaccccattcgcaataccctta
actccgtgggccggcaaacttaaccttgcagggaagccagaagaatatgcaggtgtcata
gaagagctcaaaacaatgggaccctcagccatcgataccgaaattcgttccctcagtcct
catctgggaggatcaacccatctgttgtcccagttcttaacttccatctctgtcgtactg
gaatctaagcgtaattatgaagtcgttcaagcctatttagggctttttttaaaggttcat
gctagttctttgagcgaagagcatgagttgtgtaaacgggcagaaaacttatcgggagtg
cttaaggacagctggtcaacgcttcaatcaaactttgagaatactctttgtttggtctca
ttctttatgaatgctgtcatctaa

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