Daphnia magna (water flea): 116925208 Help Entry 116925208         CDS       T07514                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism dmk  Daphnia magna (water flea) Pathway dmk03040   Spliceosome Brite KEGG Orthology (KO) [BR:dmk00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116925208  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:dmk03041]     116925208    03036 Chromosome and associated proteins [BR:dmk03036]     116925208 Spliceosome [BR:dmk03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     116925208  Complex B     116925208  Complex C    U2 SnRNP specific factors     116925208 Chromosome and associated proteins [BR:dmk03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     116925208 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  p450 SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG mTOR_dom CEP104-like_TOG Motif Other DBs NCBI-GeneID:  116925208 NCBI-ProteinID:  XP_032787756 LinkDB All DBs Position LG1:6055827..6065793 Genome browser AA seq 1820 aa AA seqDB search MSWYNINITAVIVSFGGAFISIWIIRRWKALNYLQTFGIVCPNKAHFIYGNLHHLRWSKT ESIQEKQTQWLKKHGKVVGYYMGLKPRILVADLDILRDVLIKHVNIFTNRPDVPRGMPTL VSLRDGRWKEVRHILTPTFSLLKLKSMFHTINECAKLFIDILKEDSDLSKDLEIYEPLQG LTLDVISRCALALQLDCQRNPQDKILEAVRKFFRLDLSRIVVMLVCFPGLRSFFRMLFRF APSNKLIAFVLSHVRLVVARRREAKEVPVFIDALHLLLEASEGKHVESESGSQAVGLLND DEIAWNACVFLLAGYETTSTALAYITYCLSLHPEIQEKIHTEIIEKIGPDSSTLGYDDVS KLQYLELAIQESLRLFPPVPLFVSRECKETTTIKGVTIPVDCAVDVPVWSIHHDPELWPE PETFDPLRHLPEEKAGRHPLAFLPFGAGPRNCIGGRFAMLEMKCTIANLVRSFVIKASEK NSVPLSTVVRTTIMNPTDEPSVKKSETKLKMENAKAPNTYDEIAAQVQEIQSRSKVDISE KDRIGFGESGIFDSEIYGEVQSRFDGYVTSIATTDEVEEEDYDGAVAPGGRQTFTAPAAI LNEVAGEDFDPFAEHRRPTIADREDEYRAKRRKLIISPERVDPFAEGGKTPDVGSRTYAH IIREQQLRAEEQEVRRKLADKAKDGTLKAVSIPSNGEGAEAPRKRAARWDQTGEGETGPA ATPVVAPTVPTVKKKTWEVETPAVARWDETPARSKGSETPAAGGVTPGSRLWDATPGHDD SRKRNRWDETPKTERAGEFTPGFGSGWAETPRTDRGGDTIQETPTPSASKRRSRWDETPA NSSATPSGGMTPQTPSLSGAMTPRMTPGGATPIGQKAMAMATPTPGHLVTMTPEQLQAYR WEREIDERNRPIGDDELDGMFPEGYKVLPPPAGYIPLRTPARKLTATPTPLAGASSGFYM QQEDKTASKYMDTQPKGGNLPFLKPEDAQYFDKLLIDVDEDSLSPEELKERKIMTLLLKI KNGTPPMRKSALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLD DLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYV RNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLR NLVEIIEHGLVDEQQKVRTITALSIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLA AFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQ YIKTEILPHFFKSFWNHRMALDRRNYRQLVDTTVEIANRVGAAEIIGRVVDDLKDENEQY RKMVMETVEKIMGNLGAADIDARLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNSLSKR VKPYLPQICGTILWRLNNKSAKVRQQAADLISRIAAVMKTCQEEKLMGHLGVVLYEYLGE EYPEVLGSILAALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIAD RGPEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQ ERQNRVCTTVAIAIVAETCAPFTVLPGLMNEYRVPELNVQNGVLKSMSFLFEYIGEMGKD YIYSVTSLLEDALMDRDLVHRQTACAAIKHMALGVFGFGCEDALTHLLNYVWPNIFETSP HLVQAFMDAVEGMRVALGPIKVLQYALQGLFHPARKVRDVYWKIYNSLYIGGQDSLVCGY PRVSNEGKNTFNRYELDYVL NT seq 5463 nt NT seq  +upstreamnt  +downstreamnt atgtcatggtacaatatcaacattactgctgttatagtttcttttggtggagcttttatt tctatttggattatccgaagatggaaagctctaaattacttgcaaacatttggaattgta tgcccaaataaagctcactttatctatggcaatcttcatcatctacggtggtcaaaaact gaaagcatccaagagaagcaaacacaatggctcaaaaaacatggtaaagttgttggttat tacatgggcttaaaaccaaggatcttggtggctgatcttgatatcctgagagatgtgctc atcaaacatgtaaacattttcaccaataggccagatgtcccacgtggcatgccaacacta gtgtcactgagagatggaaggtggaaagaagttagacatattttaactccaacattcagt ctccttaaattgaaatcaatgttccataccataaatgaatgtgcgaaattattcatcgat attctgaaagaagattctgacctttcgaaagatttggagatttacgagcctctgcaaggt ctcacactcgatgtgatcagccgctgcgctcttgcgctgcaacttgactgccaaagaaat cctcaggataaaatccttgaagccgttcgaaaattttttcgtcttgatctgagtagaatt gttgtcatgcttgtctgctttccaggactacgttctttcttccgcatgctttttcgtttc gcaccttccaacaaactaatcgcttttgtcctgagccacgtacggcttgtcgttgctcga cgccgtgaagctaaagaggtcccggtttttattgacgcgctgcacttgctcttagaagct tcagagggtaaacatgtcgagtccgaatcaggaagccaggcagtaggactattgaacgat gatgaaatagcgtggaacgcttgtgttttccttttagctggttatgaaactacttcaact gcgctagcatacattacctattgcctcagtcttcatccagaaatccaggaaaaaattcac accgaaattatcgaaaaaatcggacctgattcatcgacgcttggctatgatgacgtttcc aaactccagtatttggaactagctattcaggaatctctccgtctgttccctccagtacct ctgtttgtctcacgagaatgtaaagaaacgactaccataaaaggagtgactatccccgtg gattgtgcggtggacgtccctgtgtggagcatccatcatgatccagaactgtggccggag cccgaaactttcgacccactcagacatttacctgaagagaaggcagggcgacatccacta gcatttttacctttcggtgctggtccacgtaattgcattggagggcggtttgccatgctt gaaatgaaatgcactatcgcaaatcttgtgcgcagtttcgtcatcaaggcgagtgagaag aattctgttccactgtcaacagtggtgagaacaacaattatgaatcccacggatgagcct tctgtgaagaagagtgaaacgaagctaaaaatggagaacgcgaaggcaccgaatacgtac gacgaaatcgcagctcaagtacaggaaatccagtcaaggagcaaggtagatatatcagaa aaagatcggatcggatttggcgaatcaggaatttttgattcagaaatctatggtgaagta caaagtcgatttgatggatatgtaacttcaattgctaccactgatgaagttgaagaagaa gactatgatggcgcagttgcacctggtggaagacaaaccttcacagctcctgctgccatc cttaatgaagtggcaggggaagattttgatccatttgcagaacaccgaaggcccaccatt gccgacagagaagatgaatacagagctaaacgcagaaagttgattatttccccggagcgt gttgatccatttgctgaaggcggtaaaactccagacgtagggtctcgcacgtacgcacac atcatccgtgaacagcagttacgcgcagaagaacaagaggttcggcgtaaacttgctgac aaagccaaggatggtactttgaaagctgtatcaataccatcaaatggcgaaggagccgaa gcaccaagaaaacgggcggcccgctgggatcaaacaggtgaaggtgaaacaggtccagcg gccactccagttgttgcaccaactgttccgaccgttaagaagaagacttgggaagtggaa acgccagcggtagctcgttgggatgaaacacctgctcgctcaaagggctccgaaacacca gcagctggaggagtcacgcctggaagtcgcttgtgggatgctacgccagggcatgacgat tcacgtaaaaggaatcgttgggatgaaacaccgaaaacagaacgggctggagaatttacc cccggtttcggttccggttgggccgaaacacctagaacagatcggggcggggacacaatt caggagacgcctactccgtcggcatcaaaacgccgcagtcgttgggatgagacaccagct aattccagtgctacaccgtctggtggaatgacaccgcaaactccttcgttatctggagcc atgactccaagaatgacccctggtggagctacccccatcggacaaaaagcaatggccatg gctacccctacccctggtcatcttgttactatgactccggaacaacttcaggcataccgc tgggaaagagaaattgacgaaagaaaccgtccgattggtgatgatgaacttgatgggatg tttccagaaggttacaaggtcctgcctccaccggcaggatatattcctctgcgcacaccg gctcggaaattgactgctacccctaccccgttggctggagcgagttctgggttctacatg caacaagaagataaaactgcctcaaaatacatggacacacaaccaaaggggggtaatttg ccctttttaaagcccgaagatgcacagtatttcgataagttgttgatcgatgtcgacgaa gattcgttaagtccagaggagttaaaagaacgaaaaattatgacccttcttcttaaaatc aaaaatggtaccccacccatgcgtaaatcggcgcttagacaaatcacggataaggctaga gaattcggtgcggggccacttttcaaccaaattcttcccttattgatgtctccaactttg gaagatcaagagcgacatttgcttgtgaaagttattgatcgtatcctttacaagttggac gacctggtgcgtccttacgttcacaaaatccttgttgttattgaaccactgcttatcgac gaagactactatgctcgcgtcgaaggacgagaaattatctccaacttggccaaagcagca ggtttagctaccatgatttccacaatgagacctgatatcgataatattgatgaatacgtg cgcaacacaactgcaagagcttttgcggtggtggcttccgcgctgggaattccatccctt cttcctttcctgaaggctgtatgtaagagtaagaagtcttggcaagcacgccacactggc attaaaattgttcagcagattgccattttgatgggctgtgccatcttacctcacctgcga aacttggtcgagatcattgaacacggcttggtggatgagcaacagaaggttcgcaccatc acagctttgtcaattgccgcgttggctgaagccgcaactccatacggtattgagagcttt gactccgtgctaaaacctctgtggaagggtatacgaacccaccgtggtaaaggattggct gctttccttaaggctattggctatttgattccacttatggatgctgaatatgcaaattac tatacccgtgaagtcatgttgattttgatccgcgagttccagtcacctgacgaggaaatg aaaaaaattgtgctaaaagtggtgaaacagtgttgtgcaacggatggcgtggaaccgcaa tatattaagaccgagattctaccccattttttcaaaagcttctggaaccataggatggca ttagacaggcgtaactatcgccagctcgtcgatactacagtggaaattgccaatcgagtg ggtgcagctgaaattattggacgagtagttgatgatttgaaggatgaaaatgaacaatac cgtaaaatggttatggaaacggtagaaaagattatgggtaaccttggggctgctgatatc gatgctcgcttggaggaacagctcatcgacggtattctttacgccttccaagagcaaacc actgaagatgtagtcatgttaaatggttttggcacgatcgtcaactcactttcaaaaaga gtcaaaccttacctgccacagatttgtggtacgattttgtggcgtttgaacaacaaatca gcgaaagttagacagcaagccgcagatttgattagtcgtattgctgcagttatgaaaact tgtcaagaagaaaaacttatgggacatttgggagttgttctctatgaatacctcggcgaa gaatatcccgaagttttgggttctattctggctgcccttaaagctattgttaacgttatt ggaatgcataagatgacaccgccaatcaaagacctacttcctcgattgacaccgatcttg aagaatcggcatgaaaaagtgcaagagaattgtatcgatttagttgggcgtattgccgat cgtggacccgagtatgtttcagcacgagaatggatgcgtatctgtttcgaacttctggaa ctgcttaaagctcacaaaaaagccattcgacgagctacagtcaacacctttggttatatc gccaaagccattggtcctcatgatgtactggctacacttcttaacaacttaaaggtgcag gagcgtcaaaatcgtgtctgcacaactgtcgccattgctatcgtagctgaaacctgtgcg ccattcaccgttctacctggtctcatgaacgaatatagagtcccagaactcaatgttcaa aatggtgttcttaagtctatgtcgttcttgttcgagtatattggcgaaatgggaaaggat tacatatattcagttacatcgctattggaagacgctttaatggatcgagatttggttcat cgtcaaacggcatgtgcggccatcaaacacatggctttgggtgttttcggcttcggttgt gaagacgccctgacccatcttctgaactacgtttggcccaacattttcgaaacttctcca catttggttcaagcttttatggatgcagttgagggtatgagagtagcgctgggtccaata aaagttctgcagtacgcattacagggtctatttcacccggctagaaaagtccgtgacgtg tattggaagatttataattcgctttacatcggaggtcaagattcactggtgtgtggttac ccaagagtgtccaatgaagggaaaaatacttttaatcgttatgaacttgattatgtcttg taa

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