Daphnia magna (water flea): 116925214
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Entry
116925214 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 23
KO
K22555
TBC1 domain family member 23
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116925214
Membrane trafficking [BR:
dmk04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116925214
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
RabGap-TBC_2
Rhodanese
BPA
Motif
Other DBs
NCBI-GeneID:
116925214
NCBI-ProteinID:
XP_032787761
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All DBs
Position
LG6:complement(8672451..8675808)
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AA seq
721 aa
AA seq
DB search
MADDLETEDGSWILALEGALDEQCSLHDLRLICRSKSIPDSMRGQVWHRLLGSSTGSTNG
LERFNEIFDLTNQSKLREDCNILVKKLDNEEEDKVSILSDLESLVTHYCKTHHVNYEPNS
GWLSILTPLVCLKLPKNELYSYFNAILDSYIPRQCHFNGVAMHLFRLLLLYHEPELCSFL
DSHKIAPNLYTQNWFLSLFAASSDLPAVLALWDYYFIRGDPFLIFFLSLVLVINAKDEIM
AHKGEKEKILETIAELPQQMEAGDIHDFCSLAVLYSAQTPFSYKRDYHQALFGEETSEKT
TDLLVLSQALCLPVSVQELLVSCHLLSPPTKADTETRALRFFLVDCRPAEQYNAGHLPTA
FHLDSNLMLTEPQAFNVAVQALLSSQKQSIAAQSAAGGEHLVFFGSGREAEDQYVHMVVA
FFLQRHVQFVGLVQGGFHAVHQALVAAQMESGIAATSTFVEPVGLVDHNPSLCLVCSSNK
SDATSTAAGKSNASGTPLYAVGSSSSNKTDFFGRMRSKSAVVKDKFLDYIVNPISVGDNE
TTPKSKSKDHPSTAGKSKGTGKLYRNIAPVFSIDDDQDGDDPSFEGSSEREADAPNQELV
AISSWLKRPDVITPFRCHEVKESGHAFPSYLLITSTHLYALREIEDRPGFARISVNRSLS
SIMKITSKKRHPEFITFKYGNMKGEETIIVDLDRFVVPQAGDAVKLVKLQLFNNSPTNAN
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatttagagacagaggatggctcttggatcttagctctagaaggagcacta
gatgaacaatgtagcctgcatgacctgcgattgatctgccgcagtaaaagtatccccgat
tccatgcgtggccaagtttggcatcggttattgggatcctctaccggctctaccaatgga
ctcgaacgattcaacgaaatatttgacctgacaaatcaatcgaaactaagggaagactgc
aatatcttagtaaaaaagttggacaatgaagaagaagacaaagtttccatcctatctgat
cttgagtctcttgttactcactattgcaaaactcaccacgtgaactacgaaccaaacagt
ggctggcttagtattctcacacccctggtctgcttaaaactccccaaaaatgaactttac
agctatttcaatgcaattttagattcatatattccaaggcagtgccattttaatggtgta
gctatgcatctatttcgactacttttgctgtaccatgaaccagagctctgttcgttccta
gattcccacaaaattgcaccaaatttatacacacagaattggttcctctccctttttgct
gcctcaagtgatttgccagctgtattagctctatgggattattatttcattcgaggcgat
ccttttttaatattcttcctctccttagtgctcgtcatcaacgccaaggatgagataatg
gctcacaagggtgaaaaggaaaaaatattggaaactatcgcagaacttccgcaacaaatg
gaagctggtgatattcacgacttttgctcattagctgttctctattcggcacaaactcct
ttttcgtacaagagggactaccatcaagctctttttggtgaagaaacgtcggaaaaaact
acggatcttttggttctgtcccaagccctttgccttcctgtatctgtgcaggaattgcta
gtcagctgccatttgttgagtcccccaacaaaagctgacaccgaaaccagagctttacga
tttttccttgtcgattgtcgaccagcggaacaatacaacgcgggccatcttcctacagct
tttcatctcgattcaaatcttatgttaaccgagcctcaagcgttcaatgttgctgtgcaa
gcgctactctcctctcagaaacagtcaatcgctgcgcaatcggctgccggaggagagcac
ttggtgttttttggttcgggcagagaagcagaagatcaatatgtacatatggtcgtcgcc
tttttccttcaaagacatgttcagtttgtcggccttgtccaaggcgggttccatgctgtg
catcaggctcttgttgcagctcagatggaaagcgggattgctgccacgtcgacatttgtt
gaaccagtcggactagtcgatcacaatccatcattgtgccttgtctgtagttccaacaaa
tcagatgcaacatcgacagctgctggcaaaagcaatgctagtggaacaccactatacgca
gtgggatcttcttcctctaacaaaacggatttctttgggcggatgcgttcaaagtctgca
gtagtcaaagacaaatttctcgattacattgtcaatcctatttcagttggagacaatgaa
acgacaccgaaatccaaaagcaaagatcatcccagtactgcagggaagagcaaaggaacc
ggcaaactttaccgaaatatagcgcccgtgttttcaattgacgatgatcaagacggagat
gatccatcatttgagggaagttctgaaagagaggcagatgctccgaatcaggaactcgta
gccatatcgtcatggctcaagagaccagacgttatcactcctttccgttgccacgaagta
aaagagagtgggcatgcttttccaagttacctgcttattacgtcaactcacctatatgct
ctgcgagaaatcgaggatcgtccgggtttcgctcgcattagcgttaatcgctcgttgtca
tccatcatgaaaatcaccagcaaaaaacggcatccggaattcatcaccttcaaatatggc
aacatgaagggtgaagaaactataattgtagatttagacagatttgtcgtcccccaagct
ggagatgctgttaagttggttaaattgcaactattcaacaatagcccaactaatgcgaat
agctga
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