Daphnia magna (water flea): 116925301
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Entry
116925301 CDS
T07514
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116925301
Membrane trafficking [BR:
dmk04131
]
Protein recycling
Others
EARP complex
116925301
Endosome - Golgi transport
Tethering complex
GARP complex
116925301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
116925301
NCBI-ProteinID:
XP_032787877
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All DBs
Position
LG1:6097741..6100704
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AA seq
701 aa
AA seq
DB search
MEDKSDTQIKMDLKDSLKDSIIKEALNSGVDLRQYSQQVEQQLQEVELVSVQDYVNQGTS
LAQLHSQFTHCDAALERMENLLSTFRSQLGGLSSDILQLQHQSAQLGLRLSNRQAARSLA
GQMIDDLVIPEALIRHLLETPVTEPVFSEQLIILQAKLALSGDHHQRCSRAAQDVVPVLG
ALRIKVVERLRHFLLLKLQQLRRPLANYQLPQNSLLKHKSFYHFLITQEPEIAYEVRQDY
VQTMSKLYFSYFKSYSTRLLKLVDTNSVNKDDVLGSEDASLGAAAAAAARSLFGRAAPSA
RNSSSKSTVFTLGTRIEVVTNLEAPVLVPHAAATGTSAGHKGETKYSYEIVFRSQHYALA
DNACREYLFLCEFFHVERAPAMELFQEVMGKTCTIYMKFVEEYVSTCYDSLALFLCIQMV
QRLQYLCHKRAVPALDFYYESLISILWPRFEYLVQANIQSVRDCDPSRLYSHIDTRPHYV
VRRYAEYTSAISAIHEHNSITSAMDWTPRLHHLLSTMQEEVEGFTLRLAAAFTKRKDQLV
ALINNYDLMLSVMTERNREESREASRCKELLSARISEFVEEILFVHFEGLVRFVKDCELI
LTRGLNEALRNEERRATQTINSFMAGWKKSLDEINREILNLFPNFKNGTNILQATLTQLV
EYYHRFQKILTQHPFRNVPARADLINIHQLMVEVRRYKPAF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaagtgatacccaaatcaaaatggatttgaaggatagtctgaaagacagc
attataaaagaagcacttaattcaggtgtagatttaaggcaatattcacagcaagttgaa
caacaactgcaggaggttgaactagtatcagtccaagactatgtaaatcaaggaacatcg
ctcgcacagcttcattcacagttcactcactgtgatgctgctcttgaaagaatggaaaat
cttctgagtacgtttagatctcagctaggtggtttgagcagtgatatcttacaactccaa
catcagtcagcccagctggggttgcgactttctaaccgccaagctgctagatcattagct
ggccaaatgattgatgatttagttatccctgaagcactcataaggcacttgttggaaact
ccagtgacagaaccagttttctctgaacaactaataatacttcaggcaaagctggccttg
agtggagaccatcatcaaaggtgcagtagggctgctcaggacgtcgtacctgttcttggt
gcgttgcggattaaggtggttgaaagattacgccattttttgctcttgaaattgcagcag
ctcagaaggcctcttgctaattatcaactaccgcaaaattcactcctgaagcataagagt
ttttatcattttcttataactcaagagccagagatagcttatgaagtgagacaagactat
gtgcagaccatgtccaagctatatttttcctatttcaagagctattcgacgcgtctattg
aaacttgtggatacaaatagcgttaataaggatgacgttcttggttcggaggatgcatct
ttaggggcggcggcggcagcagctgctaggtcgttatttggaagagccgctcctagtgcg
cgaaattccagcagtaaatcgacggtcttcacgttgggaactcgaattgaagtcgttacc
aatttagaggcccctgtactggttccccatgcagcagcgacaggcacgagcgctggccat
aagggcgaaacaaaatattcgtacgaaattgttttccgatctcagcattacgcactcgcg
gataatgcttgccgagaatacctattcttgtgcgaatttttccacgttgagagggccccc
gccatggagctctttcaagaagttatgggaaagacttgtaccatctacatgaaatttgtc
gaagagtatgtctccacttgttacgattccctggcactctttctttgcatccaaatggtc
cagcgattgcaatatctttgccacaagagagctgttccagcactggatttttattatgaa
tcactgatttccatattatggcctagattcgaatatttggtacaggcaaacattcaaagt
gttcgtgactgcgatccatctagattatattctcacatcgacacacgaccacattatgta
gtacgacgctatgccgagtacacatccgctatttcagcgattcacgaacataacagtata
acttcggccatggactggactccacgcttacatcacctactttcaactatgcaagaagaa
gtcgaaggctttacactgcgtctggctgcagcgtttaccaaaaggaaggatcaactagta
gcactgattaataattatgacttaatgcttagtgtgatgacggagcgcaacagagaagaa
agtcgcgaggcctcacgctgcaaagaattgctctccgctcggatatccgaatttgttgag
gaaatattgtttgtccactttgaaggactcgtccgctttgtaaaggactgcgaactcata
ctaactcggggacttaacgaagcgttgcggaatgaagaacgtcgagcaacgcaaaccata
aactctttcatggcagggtggaagaaatctttagatgagatcaacagagaaattctaaac
ctttttccaaattttaaaaatggtaccaacattctacaagcgacgctaactcaactcgtc
gaatactaccaccgtttccaaaaaatccttacgcagcatccattccgcaatgttcctgct
cgtgctgatttgattaacatccatcagttaatggtggaagtcagaagatataagccggcc
ttctaa
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