Daphnia magna (water flea): 116925379
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Entry
116925379 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmk03037
]
116925379
Cilium and associated proteins [BR:
dmk03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116925379
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_6
TPR_12
TPR_8
TPR_16
TPR_19
TPR_11
ANAPC3
TPR_10
ARM_TT21_4th
HAT_PRP39_C
TPR-S
ARM_TT21_N
TPR_9
TPR_CcmH_CycH
TPR_15
NatA_aux_su
RNPP_C
Motif
Other DBs
NCBI-GeneID:
116925379
NCBI-ProteinID:
XP_045031593
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Position
LG6:9552287..9556270
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AA seq
801 aa
AA seq
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MDKYNLTAYDEEDDLYSGFNEFHPTLNTSSLIQDSLSRDVKQQQSMIQMQQSRGVTASRG
ANATAVARPLTAIHGAGYTSSRMTTANQTYDPLNQSGRVTTPFAEPKTVDPPEKQMKMLE
SSIHRIVEESILANSKEEFRVALDKAKEAVNKEKSLIRQKEQSGMGESNNDLAFMVHYCW
CVLFVLFNLANQYVANGLFSEAMSSYQQLIKNRTFANIGRLRLNIANLHFRLGQYALALK
QYRMALDQVPAHFTTLRTKIMQNIGLLFIKMGQYNDACTSFEFVMQEKPDFKTGLHMVLS
YYALADRENMRKSFLRLLDVHAEADDFEKLVPEGDAQWNSLRESLNNDPLHRLERQAKFE
GERCILMSAKLISPVIEDTFTVGYQWCVEAIKESTHNHLADDLEINKAVLFLRQKDVAQA
TETLRSFEKRSNKMATNAAVNLSTIYYLQGDVASAEKYAEVARDSDPYNAAAFVCLGNCS
LRRSDFNKAKDFFLCALDNDAACVEALYNLGLTYRSTNQVEKSMEQFVKLQMVLRHQPEV
LFQIANLNEDLGNDEQAIEWYLQVHTVVPSDEGVLQKLGETFDRLGDRQQAFQYYSDSYR
HYPSNLEVIRWLASYYTEMHVPEKAISLYERAGQMRPNEVQWQLAVASCTQRVGNYHKAL
QILKSTRSKFPENIECLRALIRLCTDLGLKEAGDYASDLRKLEHSQNETIQENKRTGTSV
TYSSGRGSGLSSAASGVDSTLKSQPTSAESLSKSIHLYQTTPVDTSYQDQLGPLQDRPRT
SRRLMNVETDDLDVGSDLLPL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggataaatataacctgacagcgtatgatgaagaagatgatctttattctggatttaat
gagttccatcctacattgaacacttccagtcttatacaagattctctttccagagatgta
aaacagcaacaatcaatgatacaaatgcagcaatcaaggggtgttacagcatcccgtgga
gcaaatgcaactgcagttgccaggccattgactgccatccatggtgctggatatacctct
tcaaggatgacaacagctaatcagacctatgatcctcttaaccagtcgggaagagttaca
acaccttttgcagaaccgaaaaccgttgatccaccagaaaaacaaatgaagatgctggag
agcagcattcaccggattgtggaagaatccatacttgcaaacagcaaagaagaattcaga
gtggcgctggataaggccaaagaagcagttaacaaagaaaaaagtcttatacggcaaaaa
gaacaatctggaatgggagaatcaaataatgacttggccttcatggtacactactgctgg
tgcgtcctttttgttttattcaatctcgcgaatcagtatgttgccaacggtttgttttcc
gaagcaatgtcatcctatcaacagttgattaaaaatcgtacatttgccaacatcggccga
ctacgtctcaatattgctaatttgcatttccggctcggacagtatgcccttgcattgaag
cagtatcggatggccttggatcaagttccagcccatttcacaacactaaggacaaaaatt
atgcaaaatattggcttgctgtttatcaaaatgggacaatacaatgatgcctgtacgagt
ttcgaatttgttatgcaagaaaaacccgacttcaaaacaggtttacacatggtgctaagt
tactacgcattggctgatcgagaaaatatgcgtaaatcatttttgcgcttgttggacgtt
catgctgaggcagacgactttgagaaattggtgccggagggtgacgcccagtggaattct
ctgcgtgaatccttgaataacgatccgttacaccgtttggagcgtcaggccaaatttgaa
ggagaaagatgcatattgatgtcggccaagttaatctcgccggtcatcgaagatactttt
actgtgggctaccagtggtgcgtcgaagcgatcaaagagtcaacccacaaccatctagca
gacgatttggagatcaataaagctgttctttttttacgccagaaggatgtggctcaggct
actgaaacgttaaggagtttcgagaaacggtccaataaaatggctaccaacgcagccgtc
aacctgtccacgatttattacctccaaggtgatgttgcaagcgctgagaaatatgccgaa
gtagcccgagattcggatccttacaacgcagctgcttttgtctgcttaggcaactgttct
ctgcgtcgttcggattttaacaaagccaaagacttttttctctgcgccttggataatgat
gctgcttgtgttgaagcgttatacaatctcggtctaacgtaccgatcaacgaaccaagtt
gagaaaagcatggaacaatttgtcaaactacaaatggtgttgcgtcatcagcccgaagtc
ctttttcagatcgctaatctcaacgaggatctcggcaatgacgaacaagcgattgaatgg
tatttgcaagttcatacggtggtgccgtctgatgaaggcgtccttcagaaattgggagaa
acttttgatcgtctaggagacaggcaacaggcttttcaatactattccgattcgtatcgt
cactatccatcgaatttggaagtgattcggtggttggcgtcctattacacggagatgcac
gtcccagaaaaagccatttcgttgtacgaacgtgctggacaaatgcgtcctaatgaagtt
caatggcagttggcagtggcgagctgcacacaacgagttggaaactatcataaagctctg
caaattttgaagagtacccgctcgaaatttcctgaaaatatcgaatgtttgagagctttg
atccggttatgcaccgatctcgggttgaaagaggctggagactatgcatccgatttacgt
aaattggagcacagccagaacgaaacgatccaggagaataagcgaactggcacaagcgtg
acctacagtagcggacgaggatcaggactgagttcggctgcgagcggagtagactcaacc
ctaaaaagccaaccaacttcagcggaatcactttcaaaatcaattcatttgtatcaaact
actcccgtcgatacgagttaccaggatcaactgggtccattgcaagatcgtcctagaact
agccggcggctgatgaatgtcgaaacagatgatctggatgtaggcagcgatctgttgcca
ctctga
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integrated database retrieval system
