Daphnia magna (water flea): 116925404
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Entry
116925404 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(III) chain
Organism
dmk
Daphnia magna (water flea)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCL9
Motif
Other DBs
NCBI-GeneID:
116925404
NCBI-ProteinID:
XP_032787985
LinkDB
All DBs
AA seq
2207 aa
AA seq
DB search
MSKESKEKRDKKGGGAAGQANQQQQAPPTSSSSSSSSSSSSSSSSIGSSVSPSHGSSAPG
SNSNGVNNVSANIINNLQSENSPTTPATSSVPPLALQQPATPTSSSSTSSAVSNSSCPDS
SPPPLQADPSGSAVAVNHKEDSGLLQQQQQQQQGVSLVSNGENNSSDLLLTPGDVVNNHQ
HSPSSVVGGGSGAPLASSPQQQQQHGGGGGGGGGIGNHLTSNGPPTPSSGGNGGGSNLLD
LKGPNSNNMVNANGSLLPSGMESFLNDPGQDAFHFSPIESVKSGGGGEMMGGSGPDGSGG
PDGGMFVNQLLKMEDGLSGADFGHLSDPCQGNPMGMGMGMPGNVMMGGGPMMGGPMGGPM
SGQMGGPMGGPMGGPMSGMGGPVDGGGMVGQSPQQQQQQLLPPQQQQQQQQQQQQPIKQQ
PGNSTMEAQYMQQQSQIFVFSTSLANKAAESVHQGQFQTIIAFHCSQPGTKKILEKYPPK
NPNNRNPPNWMQQQQMQQQQMHQKPKQMQQQQHQPGGPNPYCQSNMPMKGIGGHFGTGPG
PGPGPGMSPNPGMGGGPGGMSGPGDFNQMGGPNTMGGWNPGNEPMMSNMSMPMSMPGQGM
MRGPPGSQQSNMGPYGQMGNAPGGPGGPGGLMQQQQCCPTGPGGPNHPTGMVPCGPASGG
GPVPCSSAGPMGNPGGPMCANKGGPGGMDGSMGQMGGPGSAGGMMAGIPAGSPMGMGGPP
GPGGPMGMGNGGRPGNGNMPGGPMMSQSMQAGNMNMPPGVKIPDENLTPQQRQHREEQLA
TIRKMQQLLFPENAGPDGGIPGGMMGPGSSGSPCPTGPGNQQPGMMGPMSGGPGGPPGNQ
GGMMMMGQQQQQPPHGMMPGGPGQMMMGGGPNPMMQQQQPQQQQQQQQQQPPPPPPQQTT
SSKPPAKKKRGGAAAAAAAAAAAAAAANNAAGGPAPGGNNGPSGPMGMGGGPMGGPPMGG
MMPMNMPPGMGMPGHPQMHGGPMQQQQGGPMGPGGMGPGSMGMQMGMGGPMGPMGGPMGG
QMGGPMGNQMGGPMGGGQMGGPMGNQMGGPMGGGQMGGPMMGGPMMNQHNMGPMGPMGPM
GGHMGNPNMMPMNMQPGGPGSGPSPGPRLPQGGPGNMRMQGPPPPYHQTQRSASVPGSMT
SPGPGSPNGTAGLSMPSPRAASGLNSPADGQRGGYQQQQQRIPSGPSPSSSNHLNTPLDS
PNPNNGGGGGRSMNPSNPGTPLAGPGPPHVSPGMGNLISAGQPQPDGVSFGRQLQSFAQQ
KQQHGGQQPNKQQQQQNEPNLMPVPSPQQIQYLNAFEAQELTIQKQPNTSLRDTDILSPS
LQSGNMDGSGLGSSCPDSQGNNNQGQGHNRGMSGPNTPLTPSSNANDSLPPRYPGHNNSS
SCGGGAGAGPQTPHTPNPTNPFTVPSPSPAGSNNQCQQQQQQQQQQSSNQNNMAGPHTPL
APTEKARYPGPSPGQQPQQQQQQQQQQGPRTPVSSSMDGSSGGMPRTPGSINMDMMGGGG
GNGGGGGNRYPGSSPQMSGGPASVGAPGFNQNSGGPMMTGQGPASYPTGPGGPGMKMPSS
PFPDLSSPRMGGGGGGGGGGGMGDMNSSGNYPGAPSDIPLNPGGTPNNAMGPSPISSGPP
NNKMSTPFDPISSMAQMSQQLTSQVGPGPPMSSTPPPSMMMMGGPNGMMGPGGMMGGMGP
GGMGGPGGQMMGQFNPSMHGMQGMPQQMGDPNSMMMGPGNGGPGQSGPGMNMHGGYGPGH
NMGGPGGQMMGPGDPSKGGMMMGGPPRPSISPAFPGPGMQGMQQQQQGPINGPMGPMSGG
MPRMMGGPGGRGPGPSSGGPFNGANVQVKASAPNTIQYLPARPQTTAPSPRGPPSLEFLQ
RFTGPMSGNMDGGKPGAGGGGGGQNQMFFNSGGGGGGPGGPHSGMGGMPMNMGGPNGPGM
GQQPGMGGPMGNMNMGGMGPGGPMNGPGSGGPGPNGPNNMMNNPNNPMGGPMGGGGMNGP
GPGGGGGGVMSPGNGGMNGPGPGNGGPMGMPQQMGGMGMNNGPMMGGPQGPMQMQRHPGP
GPMGMRPQQQQQQMQYGGPPGNPMGNDQGGMYMGPGGNMGGGGMGGGPMGGGPGNNPMMM
GGGGGGPNPNMYNPSSGGGKPSSGPGGDPNQGPQGGGGGGPGGFKSSPFMGPTTADPNYA
QQFHNFQQQLYATNTRSQMSNNQQQQQQHQHQAMGAAGQPGNFFGHK
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagagagcaaagagaagagagacaagaaagggggcggggcagccggacaagcc
aaccagcaacaacaagcccctcctacctcgtcgtcgtcgtcatcgtcgtcgtcgtcttcg
tcttcgtcgtcgtcgatcggcagttcggtgtctccatctcacggctcttcggcgcccggc
tccaacagcaacggcgtcaacaacgtgtcggccaacatcatcaacaacctgcagtcggag
aacagtccgaccacgccggccacctcttccgtgccgcccctggccctccagcagccggcc
acgcccacgtcgtcgtcgagcacgtcgtcggccgtgtccaattcttcatgccccgattcg
tcaccaccgccactgcaggccgatccgtccggcagcgcggtggccgtcaatcacaaggaa
gattcgggcttgttacaacagcaacaacaacaacaacagggcgtgtcgttagtgagcaat
ggtgagaacaattcgagtgatttgttgttgacgccaggtgacgtggtaaacaatcatcaa
cattcaccgtcgtcagtggtcggcggaggatcaggggcgcccttggcatcgtcgccgcaa
caacaacaacaacatggtggtgggggtggtgggggcggtggtattggcaatcatttaact
agcaacggaccgcccactccatcgtcaggtggtaacggtggaggttcaaatctcctcgac
ctgaaaggacccaacagtaacaatatggtcaacgccaatggatcgctcctgccctccggc
atggagagtttcctcaacgatcctggacaagacgcgtttcatttttcgcccatcgagtcg
gtgaaatccggtgggggcggcgagatgatgggcggatcgggtcccgatggttctggcgga
ccggacggcggcatgtttgtcaatcagctgttgaaaatggaagacggcctcagcggagca
gacttcggtcatctttctgacccgtgccaaggaaacccgatgggcatgggaatgggcatg
cccggcaacgtgatgatgggtggcggaccgatgatgggtggccccatgggtggtcccatg
agcggacagatgggtggacccatgggtggacctatgggaggacccatgtccggcatgggt
ggaccggttgacggtggcggcatggttggccaatcgccccagcagcagcagcaacaactt
ttgcctccgcaacaacaacaacaacagcagcagcagcagcaacagcccatcaagcagcag
ccgggcaacagcacgatggaggcgcagtacatgcagcagcagtcgcagatcttcgtcttc
agcaccagcctggccaataaagcggccgaatcggtccatcaaggacaatttcagaccatc
atcgccttccactgttcccaacccggaacgaaaaagattctcgagaaatatccgcccaag
aatccaaacaaccggaatccgcccaactggatgcagcagcagcaaatgcaacagcagcaa
atgcatcagaaaccgaaacagatgcagcagcaacagcatcagccgggcggacccaatcct
tactgccaatcgaacatgcccatgaaaggcattggcggacatttcgggacgggtcctggc
ccaggaccgggtccggggatgagtcccaatcccggcatgggaggagggcctggcggcatg
agcggaccgggcgatttcaatcaaatgggtggacccaacacgatgggtggatggaatccc
ggaaatgaaccgatgatgtcgaacatgtcgatgcctatgtcgatgcccggtcagggcatg
atgcgcgggccacccggatctcagcagagcaacatggggccgtacggtcagatgggcaat
gcacccggaggtccaggcgggcctggcgggttgatgcagcagcaacagtgttgtccaacg
ggtcctggtgggccgaatcatccgacggggatggtaccctgcggtccagccagcggtggt
ggccccgttccttgctcgtcggccggtccgatgggaaaccccggtggtccaatgtgcgcc
aacaaaggaggacccggcggtatggatggatccatggggcaaatgggtgggccaggatca
gcaggaggaatgatggccggcattccggctggaagtccaatgggtatgggaggaccacca
ggtccaggaggaccaatgggcatgggaaacggcggccgtcctggcaatggaaacatgccc
ggcggacccatgatgtcccagtcgatgcaagccggaaacatgaacatgcctccaggagtt
aaaatccctgacgagaacttgacacctcaacagcgacaacaccgagaggagcagctggcc
accataaggaagatgcagcagttgctctttcctgagaacgctggacccgacggtggaatt
ccgggcggcatgatgggccctggatccagcgggagtccatgcccgacaggtcccggcaat
caacaacccggcatgatgggtcctatgagtggtggacctggaggtccacccggaaatcaa
ggtggcatgatgatgatgggccagcaacagcaacaaccccctcacggcatgatgcccggc
ggccctggtcaaatgatgatgggcggtggccccaacccgatgatgcagcagcaacagccg
cagcagcagcaacaacaacaacaacaacaaccgcctcctccgccaccccagcagacgacg
tcatctaaaccgccggccaagaagaagcgaggcggagcggcggcggcggcagcggcggcc
gctgcagctgcagccgcggccaataacgcggcgggaggtccagcaccaggtggaaataac
gggccatccggacctatgggtatgggtggcggtccgatgggtggaccacccatgggcgga
atgatgcctatgaatatgcctcccgggatgggcatgcccggccatccacaaatgcacggc
ggacctatgcagcagcaacaaggcgggccgatgggacccggaggaatgggtcccggctcc
atgggaatgcagatgggcatgggtggacctatggggcccatgggcggaccaatgggtggc
cagatgggtggcccgatgggaaatcaaatgggaggacccatgggcggcggtcaaatgggt
ggacccatgggcaaccaaatgggagggcctatgggtggcggccaaatgggtggacccatg
atgggcggcccgatgatgaaccagcacaatatggggcctatggggcccatgggccccatg
ggcggacatatgggaaacccgaacatgatgcccatgaatatgcaaccgggcggacctgga
tctggtcctagtcccggccctcgattacctcaaggtggaccaggcaatatgagaatgcaa
ggtccacctccaccttaccatcagacgcagcgatcggccagcgtgcccggttcgatgacg
agccccggccctggttcacccaacggcaccgccggcctgtcaatgccttcacctcgagcc
gcatcagggctcaattcaccggccgatggccaacgagggggttaccaacagcaacagcag
aggataccgtccgggcccagcccgtcttcctccaatcatttaaatactccgctcgactct
ccgaaccccaacaacggcggcggaggaggtcgatcgatgaaccccagtaatcccggtaca
cctttagctggaccaggaccacctcatgtctcgcccggcatgggtaacctcatatctgct
ggacaacctcagcctgatggcgtgtcgtttggccgccagttgcagtcatttgcccagcag
aaacagcagcacggtggccagcagccgaataaacagcagcagcaacagaacgagccgaat
ttgatgcccgttccatcgccgcagcaaatacagtacctgaacgcgttcgaggcccaggag
ctgaccattcaaaagcagccaaacaccagcttacgggacacggacattctttcgccttcg
ttgcagtctgggaatatggacggaagcggattaggctcatcctgtccagactctcagggc
aacaacaatcaaggtcagggccataatcgaggcatgtctggccccaataccccgctcacg
ccgtcttccaatgccaacgactcgctaccgcctcgctatccgggtcataataactcttct
tcctgcggaggtggtgctggtgccggcccgcaaacgccgcacacgcccaaccctaccaac
ccgtttacggtgcccagtcccagcccagcgggtagcaacaatcagtgtcagcagcagcag
caacagcagcagcagcagagctctaatcaaaacaacatggctggacctcacacacctctg
gcccctacagagaaggcccgttatccgggcccgtctcctggccaacaacctcagcagcag
cagcaacaacagcaacaacaagggccgcggacacccgtcagttccagcatggatggcagt
tctggcggcatgcctcgaacgcccggcagcatcaacatggacatgatgggcggtggaggc
ggcaacggcggaggtggaggcaatcggtatcccggctccagtccacagatgtcgggaggt
cctgccagtgtcggtgcgcctggattcaaccagaattctggaggtcccatgatgactggg
caaggaccggcatcctatccgactggccctggtggccccggtatgaagatgccttcgtcg
cctttcccggacttatcgtcacccaggatgggtggaggaggaggaggtggaggaggagga
gggatgggcgacatgaattcgagcggaaactatcccggtgctccgtctgatattccgctg
aatcctggcgggacgcccaacaacgccatgggaccttcgcccatctcgtcggggcccccc
aacaacaagatgtcaactcccttcgatccaatctcatcgatggctcaaatgtcgcaacag
ctgacgagtcaagtcggccccggaccgcccatgtcgtcaacgcctccaccatctatgatg
atgatgggtgggccgaacggaatgatgggccctggcggaatgatgggtggcatgggaccc
ggtggaatgggcggacctggcggacagatgatgggtcaattcaatccgtctatgcatggc
atgcagggaatgccacagcagatgggagatcccaattccatgatgatgggtcccggcaat
gggggaccaggccaatcaggacctggaatgaacatgcacggcggctatggacctggacat
aacatgggcggtcctggtggccaaatgatgggtcccggagatccgtcgaaaggtggcatg
atgatgggtggaccgccaagaccgtcgatatcgccagcatttcccggtcccggaatgcaa
ggaatgcagcaacagcagcaaggccctatcaatggaccaatgggccccatgtctggtggc
atgcctagaatgatgggcggcccgggcgggcgaggtcccggaccgtctagtggcggcccg
ttcaacggtgccaacgttcaagtgaaggcgagtgcgcccaacacgatccagtacctacct
gccagacctcaaacaacggcgcctagcccgagaggacctccaagcttagaatttcttcag
cgcttcactggacccatgtctggcaacatggatggcggcaaaccaggagcgggcggagga
ggcggaggtcagaatcagatgtttttcaacagcggtggtggcggaggtggtccaggcgga
cctcattccggcatgggtggcatgcccatgaacatgggcggaccaaacggacctggcatg
ggtcagcaacctggaatgggaggacctatgggcaacatgaacatgggcggcatggggcct
ggaggtcccatgaacggcccgggaagtggcggcccgggacctaacggacccaacaacatg
atgaacaacccaaacaacccgatgggtggaccaatgggtggcggtggaatgaacggccct
ggccccggtggtggaggtggcggcgtcatgagtccaggcaacggtggaatgaatggaccg
ggtcctggcaatggcggaccgatgggaatgcctcagcaaatgggaggcatgggaatgaac
aacggccccatgatgggtggaccccagggtcctatgcaaatgcaaagacatcctggaccc
ggaccgatgggcatgcggccgcagcaacaacaacagcaaatgcaatacggtggcccaccg
ggcaacccgatgggcaacgatcaaggcggcatgtacatgggtccaggtggcaacatggga
ggaggtggcatgggcggcggaccgatgggtggaggtccgggcaacaatcccatgatgatg
ggcggcggtggaggtggaccgaacccgaacatgtacaacccttcatccggtggtggtaaa
ccgtcgtccggtccaggcggcgatcccaatcaaggcccgcagggtggaggaggaggcggc
cctggtggattcaagtcctccccgttcatgggtccgaccactgccgatcccaactatgca
caacagttccataatttccagcagcagttgtacgccacgaatacgagaagtcaaatgagc
aacaaccaacaacagcaacaacaacatcaacaccaggccatgggtgcggccggccagccg
ggcaactttttcggccataaatga
DBGET
integrated database retrieval system
