Daphnia magna (water flea): 116925427
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Entry
116925427 CDS
T07514
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116925427
03036 Chromosome and associated proteins [BR:
dmk03036
]
116925427
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmk03037
]
116925427
Enzymes [BR:
dmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116925427
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116925427
UBL E3 ligases
116925427
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116925427
Cilium and associated proteins [BR:
dmk03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116925427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
CDC45
zf-RING_5
zf-RING_10
Baculo_IE-1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
116925427
NCBI-ProteinID:
XP_032788024
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All DBs
Position
LG6:1811461..1813730
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AA seq
539 aa
AA seq
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MSSNSNARRGVPKKRKILEKIDKSKKPSASCPSSPDSGRSSPDSSCSICLGRHENKSYTN
NCLHEFCFTCLLEWSKVKPECPLCKQAFTSIIHNVRPNHEYDEHKIPLVEPQEPDLFDEL
LHHPFRYRTTVTADRRRMLALERLYAMRQFAQEGVLPHATERRPTRSRLTGTSTFRRRAY
QRDLWVRPLSDITGRYRETTPEFFQLNPAMTHRLVPWLNRELNVLLVNHENRLSYVLQLI
LRLITQLHIRSRAFREAIQSYIGAYTEHFIHEFFQFARSPYDMYGFDENADYQPRNNLQQ
EEVAVSESSDEDVPGTRPFSNEQHRVAPLDIPLPPSPQPGPSGIGRGSSSAAMIDDGQSY
SAVQGHSNAARRPSDEDEEEDGDVEIVEVVRQSSPVVITLSESEEDREEEVERNEASSSA
SRGKALKQRSPPSNRVYSRRDQQQQQRTKSKKKKRKRDRSTSRSPEQLQSTSRGRFRRET
EENNNDEAELSTSQISGGVVRYWDMDPEEIRRRLRNDGQFNPEPSTSGSRRRQKRGRND
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaactcaaatgccagacgtggggtcccaaaaaaacgcaagattttagaaaaa
atagacaaatcaaaaaagccttcagcttcctgtccatcttccccagactcaggcagatct
tcaccagactcatcctgttccatatgtcttggacggcatgaaaacaagtcctacactaat
aactgccttcatgagttttgctttacttgcctactagaatggtccaaggtgaaaccagaa
tgcccgctgtgtaaacaggcattcacttctatcattcataatgtgagaccaaatcatgaa
tatgatgagcataaaataccattggtagaacctcaagaacctgatctttttgatgaattg
cttcatcaccctttccgttacaggacaacagtcactgcagatagaaggagaatgttagca
ctggaaagactttacgcaatgaggcaatttgcacaagaaggtgtgctaccacatgcaact
gagcgtcgtcccacgagaagtcgattaactgggacgagtacctttcgccgtcgagcatat
caaagagatctgtgggttcgtccactgtcagatatcaccggccgctatcgcgaaacaacc
cccgaattctttcaactaaatcctgccatgacacatcgacttgtgccctggctaaaccga
gaattgaatgttttgttggtcaaccacgagaatcgactttcatacgttttacaactgatt
ctcagacttatcacccaacttcatattcgaagtagagcttttcgtgaagctattcaatct
tacatcggcgcatatactgaacatttcattcacgagttcttccagttcgctcgctctccg
tacgatatgtacgggttcgacgaaaatgctgactaccaaccgagaaacaatttgcaacaa
gaagaagtggccgtcagcgaatctagtgatgaagacgtgccgggcactcgaccattcagt
aatgaacaacatcgtgtggcccctcttgatattccgttacccccgtcccctcaacctgga
cccagtggaattggtcgtggttcttcttcagctgcgatgatagacgatggacaaagttat
tcggcagttcagggacattcaaatgcagcacgaagaccatcggatgaggatgaagaggag
gacggagatgttgagatcgtagaagttgtccgtcagtcttcccccgtggtgattacgttg
tcagaatccgaagaggaccgtgaagaagaggtggagcgaaacgaagctagctcttcagcg
tcacgtggtaaggccctcaaacaaagaagccctcctagcaaccgtgtttactcgcgcaga
gatcagcagcagcaacaacgcacaaaatcaaaaaagaagaaaaggaagcgtgatcgctct
acttctcggtcgcctgaacaactgcaatcaaccagcagaggccgttttaggagagaaacg
gaagagaacaataatgacgaagcggagctttcaacttcacaaatttcaggcggtgttgtc
cgctattgggatatggacccagaagaaattcgccgtcggttgcgtaatgacgggcaattc
aacccggaaccttcaacgagtggaagcagacgtcgtcaaaagcgaggcagaaacgattaa
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