Daphnia magna (water flea): 116925501
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Entry
116925501 CDS
T07514
Name
(RefSeq) probable ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116925501
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116925501
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116925501
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
zf-CCHC
Helicase_C
zf-CCHC_3
zf-CCHC_2
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116925501
NCBI-ProteinID:
XP_032788085
LinkDB
All DBs
Position
LG6:2336173..2339943
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AA seq
777 aa
AA seq
DB search
MGDDWDEVICSAPSQSSAGGSWNNNNNQTGIKPPAGRGRGAAALASQMNSVKISSDDEWG
VGVKAEKPVPSSNGWDAPAPKAGNSSDWGAPASTAPASSGGWNAPESTSQFKNDFDDQPR
GGGWGSSGANGLKSTGGGRPCHKCGEEGHMARECPKGGGGGGGSRACHKCGEEGHFSREC
PQAGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGGGSRACHKCGEEGHFSRECPQGGG
GGGSGPRTCHKCGEEGHVSRDCPQGGGGGDSKCFKCHEAGHTSKDCPNPFSELTEDGKPR
EQYIPEAVTCDEKELFKGIVCGERFNNFDKVVLQVTGKDVPQYITSFEEAGLRPLLLQNI
KNSGYIKPTPVQKASIAVILAKRDLIACAVTGSGKTAAYLVPVMNILLEQGVAGASHGML
QKPEVVIVAPTRELAIQIHREACKFSYNSVLKSVIIYGGTVVNHQRSNIQAGCNILVATA
GRLKDFLDRGIFDFTAVKFLILDEADRMLDMGFGPDIEKMVNHPTMPPKGIRRVCMFSAT
FPDEVQALAATYMEDYIFVTTGIVGGTNPDVEQLFFQCSKRDKRTKLMEVLQDLGDAKTI
VFVDSKKTADFVAAFLCNNNLQSTSIHGDRLQSQREQALRDFKNGVRNILVATNVAARGL
DIAGVNYVVNYDLPTDIEEYVHRVGRTGRVGNIGKSISFFDDEKDGPNVGKFVSLLTKSN
ADVPPFMQAMVSGVSGMGYDFGAPSSHGGFASRDVRRFGDKPGMAAALPTEAEESWD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgattgggatgaagtgatttgctctgctccatctcaaagcagtgctggaggt
tcttggaataataacaataaccaaacaggaataaaaccacctgctggcagagggagaggg
gcagctgcattagccagtcaaatgaacagtgtgaagatctcatctgatgatgaatgggga
gtgggagttaaagctgaaaaacctgttcctagctctaatggatgggatgctccagccccg
aaggctggcaattccagtgattggggagccccagcgtcaactgctcctgcaagttctggt
gggtggaatgctcctgaaagcacctcacaattcaagaatgattttgatgaccagcctcgt
ggtggtggatggggcagctctggagcaaatggattaaaaagtactggaggtggccgtcca
tgtcataagtgtggagaagaaggtcacatggcaagggagtgtccaaaaggtggtggtggc
ggtggtggcagtcgggcttgtcacaagtgtggagaagaaggacatttttccagagagtgt
ccacaagccggtgggggtggtggtagcggtccgcggacttgtcacaaatgtggggaagag
gggcatttctcaagggaatgtccacaaggaggcggcggcggcggcggtggtggaagtcgt
gcttgccataagtgtggagaagaaggacatttttccagggaatgcccacaaggaggagga
gggggtggtagtggacctcgtacgtgtcacaagtgtggagaagagggtcatgtgtcaagg
gattgtccacaaggaggaggtggtggtgacagcaagtgcttcaagtgtcacgaagctggt
cacacctcgaaagattgcccgaacccattcagtgaattgacggaagacggaaagccgcgt
gaacaatacattccggaagctgtgacgtgcgatgaaaaggaactttttaagggcatcgtc
tgtggggagcgctttaacaattttgataaggtcgtcctccaggttactggaaaagatgta
cctcaatacataacatcgttcgaagaagccggcttgcgcccactgttgcttcagaacatc
aagaattctggctacataaaaccaacacctgttcagaaagcctcgattgcagttattctg
gccaaaagagatttgattgcttgtgctgtcacgggctccggcaaaacggcggcgtactta
gtaccagttatgaacatattgttagagcaaggtgttgctggtgcgtcccacggcatgctt
caaaaaccagaagttgtaattgttgcacccactcgtgaattggccattcaaattcaccgc
gaggcgtgtaaattctcctacaactcggttttgaagtccgtgattatatatgggggaact
gtcgtgaaccatcagcggtcaaatattcaagctgggtgcaatattcttgtcgcgaccgct
gggcgactcaaggatttcctcgatcgtggaatatttgacttcacagcggtcaaattttta
atcttggacgaagctgatcgaatgcttgatatgggttttggtcccgatattgaaaaaatg
gtcaaccatcccacgatgcctccaaaagggatccgtcgtgtttgcatgttttcagctaca
ttcccagatgaagtacaagcgttggcagcgacttacatggaagactatatattcgtcaca
acgggtattgttggtggcaccaatccggatgtcgaacagctgttttttcagtgctcgaaa
agagataagagaactaagctgatggaagttttacaagatctcggtgatgccaagactatc
gtttttgtcgacagcaaaaagaccgcggatttcgtcgcagcatttttgtgcaataataac
ttacaatctaccagcattcatggagatcgtcttcagagccagcgcgagcaagcgcttcgt
gatttcaagaatggtgtcaggaatattctcgtggccaccaatgttgctgcccgtggttta
gatattgccggtgtaaactatgtcgtaaactatgacttgccaactgatattgaagagtat
gttcatcgtgttggtcgaacgggccgcgtgggaaacattggaaaatcaattagtttcttt
gacgatgaaaaagatggccctaacgttggaaaatttgtgtcgttgttaactaagtccaac
gctgatgtaccgccattcatgcaagcgatggtctcgggagtgagtggaatgggttacgac
ttcggcgcaccttcgagtcatgggggttttgctagtcgcgatgtgcgccgatttggtgat
aaacctggtatggctgctgctctgcctactgaagctgaagagagctgggattaa
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