Daphnia magna (water flea): 116925503
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Entry
116925503 CDS
T07514
Name
(RefSeq) TATA-binding protein-associated factor 2N
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116925503
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116925503
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
IHABP4_N
Motif
Other DBs
NCBI-GeneID:
116925503
NCBI-ProteinID:
XP_032788091
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All DBs
Position
LG6:complement(2374108..2377245)
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AA seq
578 aa
AA seq
DB search
MEATYGIGITNRYALFLEEGEDPLEVIKEKTKKPAEKSADAATKSGSVKPAEVKGKAGGA
PNQPAAVKKTAVLKETQANVIKPTEQNKPREDGYRSGLGPRPPRGDRGGRFPNTMPREER
NNRRNEDRPRDFGSVANTEGGSPGTGIEGEYRPRTAFRGERGAFRGGDRGGRGRARGRGG
LQDQRGKRDFDRQSGSDKSGVKPIEKREGSGPHNWGSVQDEIEGQMEPAAAEEVVEGEAE
VVAPAETTEVKEGEEVVPVAPEDEEPKELTLDEWRALRGERKKPEFNIRKPGEGEDNSQW
KKTFILDKKKDDDESEEEIIDLTAEYPQRAGRQKRLDIDIRFSDSRRGSDRGGRGRGRGR
GEGGFRGDREGGYRGGFRGDREGGEQREGGGYRGGFRGDREGGEQREGGGYRGGFRGDRE
GGEQREGGGYRGGFRGDREGGEQREGGGYRGGFRGDREGGEQREGGGYRGGYRGDREGGE
QREGGNFRGGYRGDREGGEPREGGYRGGYRGGYRGDREGGEQREGGYRGGYRGGDREGGE
RGTYRGGRGSRGGPGGNRGPSMPAAPKVDDEKDFPALG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacgtacgggataggaattaccaacaggtatgcgttatttcttgaagagggt
gaagatcctcttgaagtcatcaaagagaagactaagaaaccggcagagaagtctgccgat
gccgcaaccaagtctggaagcgtgaagccggctgaagtcaaaggcaaagccggtggagcc
cccaatcaaccagcggccgttaaaaagacagccgttctcaaggaaacgcaagccaacgtt
atcaaacccactgaacaaaacaaacctcgcgaagatggatatcgatctggtcttggtcct
agaccaccaaggggtgacaggggaggtcgtttccccaacactatgcctcgagaagagagg
aataataggaggaatgaagaccgtccaagggattttggatccgtggccaacacggaaggt
ggatctcctggcacaggcatcgagggagagtatcgtcctcgcacagcgttccgtggtgag
cgaggggcgttccgtggtggtgatcgtggcggccgtggtcgtgcacgcggacgtggtggt
ctgcaagatcaacgaggcaagcgtgattttgaccgtcaatctggctctgacaagagcggc
gttaaacctattgagaaacgcgaaggtagtggtccgcacaactggggaagcgtccaagac
gagattgaaggccagatggagcctgccgctgctgaagaagttgtcgagggagaggccgaa
gtcgtcgctcctgctgaaacaactgaagtcaaagagggagaagaggttgttccagtggct
ccggaagatgaagagcctaaggagttgacccttgatgaatggagagctttgaggggtgaa
cgtaagaagcccgagtttaacatccgtaagcccggagaaggagaagataactcccaatgg
aagaagacatttatcctggacaaaaagaaggatgacgatgaaagtgaagaggagattatc
gacctgacggccgaatatcctcaacgcgctggacgtcaaaagcgtcttgacatcgacatc
cgcttctctgactcgcgccgtggaagcgatcgtggtggacgtggtcgcggaagaggtcgt
ggcgaaggaggcttccgtggcgatcgtgaaggtggatatcgtggaggcttccgcggcgat
cgtgaaggcggagagcaacgtgaaggtggcggataccgtggaggtttccgtggcgatcgt
gaaggtggagaacaacgcgaaggtggcggataccgtggaggtttccgtggcgatcgtgaa
ggcggagaacaacgcgaaggtggcggataccgtggaggtttccgtggcgatcgtgaaggc
ggagaacaacgcgaaggtggcggataccgtggaggtttccgtggcgatcgtgaaggcgga
gaacaacgcgaaggtggcggataccgcggtggatatcgtggtgatcgagaaggcggagag
caacgcgaaggtggtaactttcgcggaggataccgtggcgatcgcgaaggtggtgagcca
cgtgagggtggctatcgcggaggttatcgtggagggtaccgcggagatcgtgaaggtggc
gaacagcgtgaaggcggatatcgtggcggctaccgcgggggagatcgcgaaggaggcgaa
cgtggtacttaccgtggtggcaggggttcccgtggtggacccggcggtaatcgcggaccg
tctatgccagccgctcccaaagtggacgatgaaaaggatttcccggccttgggctag
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