Daphnia magna (water flea): 116925504
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Entry
116925504 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116925504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116925504
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
116925504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_WDR41
eIF2A
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116925504
NCBI-ProteinID:
XP_045030828
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Position
LG6:complement(2342640..2346922)
Genome browser
AA seq
481 aa
AA seq
DB search
MLDSSYDRRLRRTMELTAGPSTVTTTSALISPTKNRPNSTRNIGDRLVPTRAGNNWQVAF
HMKEELSPTSSSIRNREGPPVASDAAGRDRSLFRSILENEVLNSGIEDPRDLQNKKRRVF
HYDSPLKPENRVSQPYSLSPLSPASQKLLQSPRKAARKIAKVPFKVLDAPELQDDFYLNL
VDWSSQNVLSVGLGACVYLWAAATSQVTRLCDLAPEGDSVTSVAWAERGHLVSVGTHRGT
VQVWDVTAGKRIHTLEGHTARVGALAWNGDLLASGSRDRLILQRDIRTPPSITQRRLSGH
RQEVCGLKWSPDNQLLASGGNDNKLFVWGLHSVTPLQTFTEHLAAVKAIAWSPHHHGVLA
SGGGTADRCIRFWNTLTGQPMQYVDTGSQVCNLAWSKHSSELVSTHGYSQNQILIWKYPS
LAQVAQLTGHSYRVLYLAMSPDGESIVTGAGDETLRFWSVFNKTRSQKETRSVLNLFTSL
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgttggattccagttatgatcgacgcctcaggcggacaatggaactaacagccggtccc
tcaactgttacaacgacctcggcgcttatctcaccgacaaagaaccgacctaattcaact
cgcaatatcggtgatcgactagtacctactcgggcgggaaataattggcaagttgccttc
catatgaaagaagaactgagccccacgtcatcaagtatacgaaatcgagaagggccgcca
gttgcgagtgacgccgcaggccgcgatcgtagtttgtttcgttcaattttagagaacgaa
gtgttgaatagtggcattgaggatcccagagatttgcaaaacaaaaaacgacgcgtgttc
cattatgatagtccattaaaaccggaaaatcgagtcagtcaaccatattcgttgtcacca
ttgagtcctgctagccaaaaactgctccaatcaccacgcaaggcagcacggaaaatagcc
aaagtgccttttaaagtccttgatgctcctgaactacaagatgatttctacttaaatcta
gtagattggtcatcacagaacgtgcttagtgttggattgggcgcatgcgtatatctctgg
gcagctgcgacaagccaagttactcggctatgcgatttggccccggaaggcgatagtgtt
acttcggtagcatgggcagagcgaggtcacttggtttcagtgggtacgcatcgaggaaca
gtacaagtctgggatgttaccgctggtaaacggattcacacgctagaagggcatacggcg
cgcgtaggtgcgctagcatggaatggagaccttcttgcttccggcagtcgagatcgcctt
atcttacagagggatatccgcactccgccttcgatcacccaacgccgattgtctgggcat
aggcaagaggtgtgtggtctaaaatggtcacccgacaaccagctcctggcatccggtggt
aatgacaataaactatttgtttggggccttcattctgttacaccactgcaaacgtttacc
gagcatttggctgcggtaaaagcgatcgcctggtcgccacatcatcatggagttttagca
agtggcggaggcaccgccgatcgctgcattcgattttggaacacccttacggggcaacct
atgcaatatgtcgacacgggatcacaagtgtgcaatttggcttggtccaagcattcgtcc
gagctggtgagtacccatggatactcacaaaaccagattcttatctggaaatacccgagc
ctagcccaagtcgcacaactgacaggtcattcatatcgtgttctttacttggcaatgtcg
cccgatggcgagtccatagtaacaggggctggcgacgagacattaaggttctggagcgtg
ttcaataaaacccgatcgcaaaaggaaacacgatcggtactgaatctgttcactagtctg
aggtaa
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