Daphnia magna (water flea): 116925541
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Entry
116925541 CDS
T07514
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116925541
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmk01009
]
116925541
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116925541
03036 Chromosome and associated proteins [BR:
dmk03036
]
116925541
Protein phosphatases and associated proteins [BR:
dmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116925541
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116925541
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116925541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
DUF4187
Motif
Other DBs
NCBI-GeneID:
116925541
NCBI-ProteinID:
XP_032788135
LinkDB
All DBs
Position
LG6:3426936..3438483
Genome browser
AA seq
691 aa
AA seq
DB search
MKTRKMRKSPEPQPAGGGSNTTSPTSSPLPHPELTVQQKQHLRERNLQQHGAGGHHATSV
GLPVQYTSTGIPIRPFLTRGSVAERVLIFEKCPTTIMTESATKSDKVTSAATAATAEKTK
RAGSPAPQPWRHSNDVQTRVQGYAKDNNKENRSTSTSISSPRSTLRRQAKANNNLLLPRF
YYPTGRPISKEQLDASLLRLAATFQQLPNCQASREHFGTIAKACGCPYYWKAILFIASGG
EKLGHVTLETFTDFWGKIINNYHDEASRFVQLLTMINLNVTVSRTDNNLNTSMNNCTGSG
RFYLIPEDFVPLVQDVVDTHPGLTFLKEAAEFHSRYVHTVIARIYYNVNRSWSGHITLTE
LRHSNLLATIRLLEEEEDINQITDYFSYEHFYVIYCKFWELDKDHDLFIDKKDLARHNDH
ALSSKMIDRIFSGAVTRGVAHNNRMVKFGNTNTNMNNQPRMSYTEFVWFLISEEDKRHST
AIEYWFRCMDLDGDGFLSMYELEYFYEEQLQRMESLGIETLPFEDCLCQMLDMIHPAVPG
KISLNDLKRCQMTPIFFDTFFNLEKYLDHEQRDPFASQRDPDSENGDEILKISDWDRYAA
EEYELLVAEEGGPDHGEDMFMREEMATGEEDGNDHSSLPLSMERDVIMADSDVNDGHDDY
SPLSVHSSLGLGNAGHRSLFSVTPCSIEYQY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgcaaaatgcgcaaatcgcccgaaccgcagccggcgggtggcggatcgaac
acgaccagtccgacgtcgtctccgttgcctcatccggaattgacggtgcagcagaaacaa
catttgcgcgaacgcaatctgcaacagcacggcgctggtggtcatcacgcgacgtcagtc
ggattgcctgtccagtacacgtcgacgggcatccccatccggccatttttgacgcgaggc
tccgtcgccgagagggttctcatttttgaaaaatgcccgacaaccatcatgacggaatcg
gccaccaaatcggacaaggtgacctctgctgccaccgccgcgacggcagaaaaaacgaaa
cgggccggcagcccagcaccgcagccttggcgacactccaacgacgttcagactcgagtg
cagggctatgccaaggataacaacaaagaaaaccgatctacatcgacgagcatttcgtcg
cccaggtcgactcttcgccgccaggcgaaagccaacaacaatcttcttttgcccagattt
tactacccaacgggacgacccatcagtaaagaacagctggatgcctcgctgttaagactg
gccgccacgtttcaacagctgcctaactgccaagccagtcgtgagcactttggaaccatc
gccaaggcttgcggctgcccttattactggaaagccatcttgtttatcgcaagcggtggc
gaaaagcttggacatgttacgctggaaaccttcaccgacttctggggaaaaatcatcaac
aactatcacgacgaagcttcgcgatttgttcaactcctgaccatgatcaatctgaatgtg
accgtgagcagaacagacaacaatttaaacacatcgatgaacaactgtaccggttctggc
cggttctatctaataccagaggatttcgtacctcttgtgcaagacgtggtcgacacccat
ccgggattgaccttcctcaaggaggcggcggaatttcattcgcgctacgttcacacggtg
atagccagaatttattacaatgtcaaccgatcctggtcaggccacatcactttaaccgaa
ctgcgccattcgaatctgttggctaccattcgcctactggaagaagaggaagatattaac
caaatcactgactacttcagttacgagcatttctacgtcatctattgcaagttttgggaa
ctcgataaagatcacgacctctttatcgataagaaagatctggctcgtcacaacgatcac
gcgttgtcttctaagatgattgaccggatattctctggagcggtcactcgtggagttgcc
cataataatcgaatggtcaaatttggcaataccaacaccaatatgaacaatcagccgcgt
atgagttacaccgagtttgtctggttcctcatctctgaagaagacaagagacactcgacg
gctatcgagtactggttcaggtgtatggacctggacggcgacggtttcctttcaatgtac
gaactggaatatttttacgaggaacaattgcaacggatggaatctttaggcatagaaaca
ttgccatttgaagattgcctgtgtcagatgttagacatgattcatccggctgtgcccggt
aaaatctcgctgaacgacctcaaacgttgccagatgacacccatctttttcgacacgttc
ttcaacctggaaaagtacctggatcacgaacaacgcgatccgtttgcatcgcaacgcgac
cccgattcagagaatggcgatgaaatactcaaaatttccgactgggatagatacgctgcc
gaagaatacgaactccttgtggccgaagagggtggaccggatcacggcgaagacatgttc
atgcgggaagaaatggccacaggcgaagaggacggcaacgaccattcttctcttccctta
tcgatggaacgtgacgtcattatggccgattcagatgttaacgacggccatgacgattat
tcgcccttgtcggtccattcaagcctgggcctcggcaatgctggccatcgttcacttttc
tcggtcacgccgtgctcgatcgaatatcaatattga
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