Daphnia magna (water flea): 116925553
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Entry
116925553 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1
KO
K03347
cullin 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
dmk04141
Protein processing in endoplasmic reticulum
dmk04310
Wnt signaling pathway
dmk04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116925553
04120 Ubiquitin mediated proteolysis
116925553
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116925553
04350 TGF-beta signaling pathway
116925553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116925553
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
116925553
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GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
116925553
NCBI-ProteinID:
XP_045026334
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Position
LG1:12578582..12582855
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AA seq
813 aa
AA seq
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MVKSSDVKGAMMSRQRGQSSYGSKAPIDLEHIWSDLLQGIEKVYNKQAMSKKQYMDLYTH
VYDYCTNVNNQGGRGNSVSIPSAATSKAKKSQAAGGAQFVGHELYKRLKEYLKAHLVSVL
KNGVDYMDETVLKFYSQQREEYQFSSKVLNGVCAYLNRHWVKRECEEGQKGIYEIYQLAL
VTWRENLFRHLHKQVTNAVLKLIEKERNGDPINTRLVSGVMNCYVELGTLLTXMENRKSE
YVKYLFFFFFFGLNEEDQSAKGQNLSVYKESFENSFLEDTERFYTRESAEFLRHNPVTEY
MKRAEQRLTEEQKRVQTCLHEATLDKLSKTCEKVLIEKHLEIFQAEFQHLLADDKHDDLG
RMYQLVSRISEGLTELRTLLEDHITQQGLSAIERKGEAAHNDPKVYVTTILDVHRKYNAL
VMSAFHNDAGFVAALDKACGRFINSNAMTKAANSSSKSPELLAKYCDLLLKKSAKNPEEA
ELEDTLNQVMVVFKYIEDKDVFQRFYSKMLAKRLVPHMSASDDAEASMISKLKQACGFEY
TSKLQRMFEDIIGVSKDLNEQFKRHLTNSAEPLDIDFSIQVLSFGSWPFQQSVNFSLPSE
LERSVQRFTTFYSSQHSGRKLHWLYQMSKGELVTNCFKNRYTLQASTLQMAVLLQYNVST
TWTATQLSDATGIKMDLLLXVAQILLKSKLLSSDDDKNELQQSSQLSLFVGYKNKKLRVN
INIPIKAELKQEQEATQRHLEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFK
PRVHIIKKCIDILIEKEYLERTEGQKDTYSYLA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcaagtgatgtaaaaggtgcaatgatgtccagacaacgtggccaaagcagt
tatgggtctaaagcacccatagatctggaacacatttggtcagaccttttacaaggcatt
gaaaaagtctacaacaaacaggccatgtctaaaaaacagtacatggatctatacactcat
gtgtacgattattgcaccaacgtaaataatcaaggaggaaggggaaattcagtttcaatc
ccctctgctgccactagtaaagccaaaaagagtcaggcggctggtggggcccagtttgtg
ggacatgaactgtataaaagattaaaggaatacctaaaggctcatttagtcagtgttctt
aagaatggagttgactacatggatgaaactgtactcaagttttactcacaacaacgggaa
gaataccagttcagctcaaaggttttgaacggagtttgtgcctatttaaatcgacattgg
gtgaaacgagagtgtgaagaagggcagaaaggaatttacgaaatttatcaattggcgctt
gttacatggagagaaaacttatttcgccatctccacaaacaagtaacaaatgccgtgctg
aaactcattgaaaaagagcgaaacggagatcctattaatacacgattagttagcggtgtc
atgaactgctacgttgaacttggtactttgcttacatagatggagaacagaaaatccgaa
tacgtaaaatatctcttttttttttttttttttggcttgaacgaggaagatcagtcagcc
aagggacagaatttatcggtctataaggagtcatttgagaattcattcttagaggatacc
gagcgcttctacacccgggaaagtgccgagttcctccgccacaatccagtgacagagtac
atgaagcgagccgaacagcggttaactgaggaacaaaaacgagtgcagacatgcttgcac
gaagccacccttgacaaattaagcaaaacctgtgaaaaagtcctcatagaaaagcatttg
gagatctttcaggcggaatttcaacacctccttgccgacgacaaacatgatgacctcggg
cggatgtaccaattggtgtcgcgcatatcagaagggttaacggaattgcgaacattgctc
gaagatcacataacccagcaaggcttgtcggccatcgaacgcaaaggagaagcagcacac
aatgatcctaaggtttacgttactaccattttggacgtgcatcgtaaatacaacgccctt
gtgatgtcagcgtttcataacgatgccggatttgtggccgctttggacaaagcttgcggg
aggttcattaatagcaacgcaatgacaaaggctgcaaattcctcgtcgaaatcgccagaa
ttgctggccaaatactgtgatcttttactgaaaaagagcgccaaaaatcctgaagaggcc
gaattagaggatacgttaaatcaagtgatggtcgtcttcaagtatattgaagacaaagac
gtattccagaggttctacagcaaaatgctggcaaagcgtttggtgccgcatatgtcggct
tcggacgacgccgaagcgtcaatgatctccaaattaaaacaagcctgtggtttcgaatat
acttctaaacttcagcgcatgtttgaagacatcatcggagtcagtaaagatctcaacgaa
caatttaagcgccatctaaccaattctgccgagccgcttgacatcgacttcagtattcag
gtcctgtcgtttggttcgtggccttttcagcaatcagtcaacttttctcttccatccgaa
ttagagcgctccgtccaacgttttactaccttttacagcagccaacacagtggtcgcaaa
ttacattggctctatcagatgtctaaaggcgaattagtcaccaattgtttcaaaaataga
tacactcttcaggcttcaactttacagatggctgtactcttgcaatacaacgtctctact
acttggacagccacacagctaagcgatgcaacaggaatcaaaatggatttattgctgtag
gtggcacaaattctgctgaaatctaaactgttgtcgtctgacgatgacaaaaacgaattg
cagcagtcatctcagctgtcgctttttgttggatacaaaaacaaaaaattacgcgttaac
atcaacattccaattaaggcggaactgaaacaagagcaagaagcgacgcaacggcattta
gaagaagacaggaagctattgatccaagccgcaattgtacgaatcatgaaaatgcgcaaa
gtacttaaacatcaacagttactagctgaggttctaaatcagctctcctctcggttcaag
ccgagagttcacataataaagaaatgtattgacattctcatcgaaaaggaatacttggag
agaaccgagggacagaaggatacttattcctacctcgcatga
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