Daphnia magna (water flea): 116925620
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Entry
116925620 CDS
T07514
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
dmk03015
mRNA surveillance pathway
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116925620
09122 Translation
03013 Nucleocytoplasmic transport
116925620
03015 mRNA surveillance pathway
116925620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116925620
03041 Spliceosome [BR:
dmk03041
]
116925620
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116925620
Spliceosome [BR:
dmk03041
]
Complex C
Other components
EJC/TREX
116925620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
116925620
NCBI-ProteinID:
XP_032788258
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Position
LG6:complement(3106908..3108004)
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AA seq
163 aa
AA seq
DB search
MADVLDIENQDEFEFDEDGDQGVAKLKEKAKKRKGRGFGGGHEAREEIKGYEAVDADAAD
DEPGPQRSVEGWILFVTGVNEEAQEEDIHDKFAEFGEIKNLHLNLDRRTGFLKGYALVEY
ETFKEAQAALEKLNDSEILGQKISVDWCFVKGPKKNKRERRRR
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttttagatattgaaaatcaagatgaattcgaatttgacgaggatggcgat
caaggagttgcaaaattgaaggaaaaagcgaagaaacgtaaagggcgcggatttggcggt
ggacacgaggcaagagaggaaattaaaggttatgaagcagtggatgctgatgctgccgat
gatgaaccaggcccacaacgatctgtcgaaggctggattttgtttgttacaggagtcaat
gaagaagcacaggaggaggatattcatgataaatttgcagagttcggagaaatcaagaat
cttcatttaaatttggatcgccggactgggtttcttaagggatatgcattggttgaatat
gaaactttcaaggaggctcaagctgcattagaaaaacttaatgactcagaaattttagga
cagaaaatttcagttgactggtgttttgtgaaaggacctaaaaaaaacaaacgagaacgg
agaaggcgataa
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