KEGG   Daphnia magna (water flea): 116925620
Entry
116925620         CDS       T07514                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03013  Nucleocytoplasmic transport
dmk03015  mRNA surveillance pathway
dmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116925620
  09122 Translation
   03013 Nucleocytoplasmic transport
    116925620
   03015 mRNA surveillance pathway
    116925620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmk03019]
    116925620
   03041 Spliceosome [BR:dmk03041]
    116925620
Messenger RNA biogenesis [BR:dmk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     116925620
Spliceosome [BR:dmk03041]
 Complex C
  Other components
   EJC/TREX
    116925620
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 116925620
NCBI-ProteinID: XP_032788258
LinkDB
Position
LG6:complement(3106908..3108004)
AA seq 163 aa
MADVLDIENQDEFEFDEDGDQGVAKLKEKAKKRKGRGFGGGHEAREEIKGYEAVDADAAD
DEPGPQRSVEGWILFVTGVNEEAQEEDIHDKFAEFGEIKNLHLNLDRRTGFLKGYALVEY
ETFKEAQAALEKLNDSEILGQKISVDWCFVKGPKKNKRERRRR
NT seq 492 nt   +upstreamnt  +downstreamnt
atggctgacgttttagatattgaaaatcaagatgaattcgaatttgacgaggatggcgat
caaggagttgcaaaattgaaggaaaaagcgaagaaacgtaaagggcgcggatttggcggt
ggacacgaggcaagagaggaaattaaaggttatgaagcagtggatgctgatgctgccgat
gatgaaccaggcccacaacgatctgtcgaaggctggattttgtttgttacaggagtcaat
gaagaagcacaggaggaggatattcatgataaatttgcagagttcggagaaatcaagaat
cttcatttaaatttggatcgccggactgggtttcttaagggatatgcattggttgaatat
gaaactttcaaggaggctcaagctgcattagaaaaacttaatgactcagaaattttagga
cagaaaatttcagttgactggtgttttgtgaaaggacctaaaaaaaacaaacgagaacgg
agaaggcgataa

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