Daphnia magna (water flea): 116925677
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Entry
116925677 CDS
T07514
Name
(RefSeq) uncharacterized protein LOC116925677
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116925677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116925677
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-60S particles
RNases
116925677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ColG_sub
Motif
Other DBs
NCBI-GeneID:
116925677
NCBI-ProteinID:
XP_032788294
LinkDB
All DBs
Position
LG1:6381116..6384195
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AA seq
696 aa
AA seq
DB search
MSEGVSKKRAARIERRKSKISAIFKVDEKQENVFCRIEDEQLVEPLQKQPKLSDEEYHTL
RIKLREKKRQIQCGPTFRLIQLGLTASLNLPKPSRVPVLVADVQSLFLYTIVGDTYNYDS
YKWCELARWNNLTQTLIFIVEDVSVDDFEENTDIFAETFRIFEDGVEMSNPASDGFTLDL
ALAYVPISHQMKNRVMEGYPSLHAACEDGYIHGVADPTVQKVNANTTAESHAVKNHEVLS
GQPYGNDITTQEKMGQKNNAADTEKLSRESSDLSNIVETKTIGATRHNEQRRQSTEVDSI
NKDEVHVSKIGSSVDDSKSDVSMQEETSGCSRLALLLNASQLISELYPLPGYEEYDNFKF
TQDIYDPVTDRSPMFSIDCEWCICVDGSYGLARVAVVDEHLKTLYHTYVKPDVEIADYLT
RYSGITEELIRDVEKRPFDVQQDLRNLLPPDAILVGQSLQSDLKAMKLFHPYIIDTSVIF
NMTGTRSFKSKLKVLAASFCGRQIQNSMDGHDPTEDAIAAMELVLLKMKMGTEFGDLILS
RNAMRKIKDSALDHDIQMKLFTFIQSHNRSATLITTSLSLQKSYHPRLLKLKKAVVKCKK
ADESLVDPVQIVLASDFQDAVTMTRASRFNSSFTLVHTYAGREQHNRKEKLKEIDKAIAN
MYTGISLNGMMIVIFGGKTNPTQNGACLVRVNKRSI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggagtttcaaaaaagagggcggcaaggattgagcgaagaaaatccaaaatt
tctgctatttttaaagtcgacgaaaagcaagagaatgttttctgtagaatagaagatgaa
cagctagttgagcctttgcagaaacagcctaaactcagtgatgaagaataccacactctt
agaataaaactcagagaaaaaaagaggcagatacagtgtggcccaacatttaggctgatt
caactaggcctcacagccagtttaaatctgcccaaaccctcccgtgttcctgttttagtg
gcggatgtgcaatccctgtttttgtatactattgttggtgatacatataattatgactca
tacaaatggtgtgagcttgcaagatggaataatttgacacaaacactaatatttattgtt
gaagatgtgtcagttgatgattttgaagaaaacactgacatttttgcagagacctttaga
atatttgaagatggagtggaaatgagcaatccagcaagtgatggctttactcttgatctt
gcattagcttatgtacccattagtcaccagatgaagaatagggttatggaaggatatcct
tcattacatgctgcatgtgaggatgggtacattcacggagttgctgatcccactgttcag
aaagttaatgctaatacaactgcagaaagccatgctgtgaagaaccatgaagttttgtcc
gggcagccatatggaaatgatataacaactcaggagaagatgggacagaaaaataacgca
gcagatacagaaaaactcagtcgagaaagcagtgacctatccaacattgttgaaacaaaa
actatcggtgcaactaggcataatgaacaaagaaggcaatccaccgaggtggactcgata
aacaaagatgaggtgcatgttagcaaaattggatcttcagtcgacgattcgaaatccgat
gtttcgatgcaagaagaaacaagtggatgtagtcgacttgcacttttgctaaatgcctct
cagcttatatctgaactatatcctcttcctggatatgaagagtatgacaatttcaagttc
actcaagatatatacgatcccgtgactgatcgttcgcctatgttttcgatagattgcgag
tggtgcatttgtgttgacgggtcctatggtttagctcgtgtagccgtcgtcgatgaacat
ctaaaaaccctttatcatacttacgttaaaccagatgtggaaattgcggactaccttacc
agatattcgggaataacagaagaattgataagagacgttgagaagaggccattcgatgtc
cagcaggatctgcgaaatctattgccccctgacgccatccttgttggtcaatctcttcag
tctgatttgaaagcaatgaagttgtttcatccatacataatcgacacgtccgtgattttc
aatatgactggcacgcgtagcttcaaaagcaaacttaaagtgttggcagcctccttctgt
ggccgtcaaattcagaattctatggatggccatgatccgactgaagatgctattgctgca
atggaacttgtattgttaaaaatgaaaatgggcaccgagtttggagatctgatcctatcg
aggaatgctatgcgaaagatcaaagattccgccttggaccacgacattcaaatgaagctg
tttacattcatccagagtcataataggagtgcaacattgattaccacgtccctgtctctg
caaaaatcataccaccctagattacttaaactgaagaaggccgttgttaaatgcaaaaaa
gcagatgaatccttggtagaccctgttcaaattgtattggctagtgattttcaggatgct
gtaacaatgacgagagcttcacggttcaatagcagttttacccttgttcacacatacgca
ggaagagaacagcacaaccgtaaggagaagctgaaagaaatcgacaaagccattgcaaat
atgtatactggtatctctttgaacgggatgatgattgtaatttttggcgggaaaactaat
ccgacacagaacggagcctgtcttgtacgcgttaataagcgctcaatttag
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