Daphnia magna (water flea): 116925726
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Entry
116925726 CDS
T07514
Name
(RefSeq) thyrotropin-releasing hormone receptor isoform X1
KO
K04282
thyrotropin-releasing hormone receptor
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04080
Neuroactive ligand-receptor interaction
dmk04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116925726
04081 Hormone signaling
116925726
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
dmk04030
]
116925726
G protein-coupled receptors [BR:
dmk04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
116925726
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GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
116925726
NCBI-ProteinID:
XP_032788360
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Position
LG6:1401075..1417326
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AA seq
457 aa
AA seq
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MDAVCSQAVNDTLNAIRSGVLMANGTDDMADEYSILENVLGANCTDWWLSSINRTSMDFL
GDDTGGTNSSFSDKEENPSYFSRDYRLVGTLFQGLILLVGVLGNLLVVMVVYRTRSMHSP
TNCYLVSLAAADCVVLIASVPNEILSYYVIGSQWIWGPIGCAVFVFLQNLGINASSLSLT
AFTVERYIAICHPMKAQSVCTVKRAKKIVGGVWAFAFCYSSPWLGLTITEPIHYKGFQTV
ERCAMKLSREEYLGYFFADIVVFYLVPLLISCVLYGLIARVLFNGHFNKYPEVCRHDNQS
SVDPTKSSRVQVVKMLVVVVVIFATLWLPYRGMLVYNSFATMHSKPSFMDLWFLMFAKTC
VYINSAINPILYTAMSIKFRRAFQRILLCAIEVEWCIIRSNRDSHLSCVHFAHRFVRLYY
YYTPDKRIKRKMFSGRLVAFASNQIVPTFYAFPFMCP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtctgctcgcaagccgtcaacgataccctcaacgctatcagaagcggagtg
ttgatggccaacgggacggatgatatggcggatgaatattctatactggagaatgtgcta
ggagcgaattgcaccgattggtggctatccagcattaaccggacgtcgatggatttccta
ggcgacgatacgggcggcacgaattcgtcgttttcggacaaagaagagaatccgtcgtat
ttttcaagagactatcgccttgtcggcacgttatttcagggattaattctactcgtaggc
gtcctcggaaatctactcgttgtcatggtcgtctatcgaacgcgttcgatgcattcacca
accaattgctacctggttagtttggctgccgccgactgcgtcgtcctcatcgcatccgtc
cccaacgaaattctctcgtattacgtcatcggcagccaatggatttggggacccatcggc
tgcgccgtcttcgttttccttcagaatttaggaatcaacgcgtcgtcgctgagtttgacg
gcgttcacggtcgagcgctacatcgccatctgccatccgatgaaggcgcaaagcgtttgc
acggtgaaacgggccaaaaagatagtgggcggtgtttgggcgtttgcattctgctattcg
tcaccttggctgggcctcaccatcaccgagccaatccattacaaaggatttcaaacggtc
gagcgttgcgccatgaaactatcgcgggaagaatacctgggttatttctttgccgacatt
gtggtgttctatttggtgccgttgctcatttcgtgcgtcctctacggcctcatcgcgcgc
gtcttgttcaacggccactttaacaaatacccagaggtctgccggcacgataatcaatcg
tcggtcgatccgactaagagctccagggttcaggttgtgaagatgctggttgtggtcgtg
gtcatcttcgctacgttatggctgccctatcgtggcatgttggtgtacaacagttttgcc
accatgcactcgaaacccagttttatggacctctggttcctcatgtttgccaaaacgtgc
gtctacatcaacagtgccatcaatcccatcttgtatacggcaatgtccatcaaatttcgt
cgagcttttcagcgcattctactttgcgccatcgaagtggaatggtgcatcatccgatcg
aatcgggattctcatctttcttgtgtacatttcgcccatcgttttgtccgattatattat
tattacacgccagataaaaggataaaaagaaaaatgttttctgggcgccttgtcgcgttc
gcttccaatcaaatcgttccgaccttctacgcttttccttttatgtgcccgtga
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