Daphnia magna (water flea): 116925861 Help Entry 116925861         CDS       T07514                                  Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism dmk  Daphnia magna (water flea) Pathway dmk03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:dmk00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     116925861  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dmk03019]     116925861 Messenger RNA biogenesis [BR:dmk03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      116925861 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Motif Other DBs NCBI-GeneID:  116925861 NCBI-ProteinID:  XP_032788513 LinkDB All DBs Position LG6:2635942..2641326 Genome browser AA seq 1557 aa AA seqDB search MEKTKHMKTLWSILSGTNQPLSFDVVGPFIESAKNWLVSGIQHFRPRDEDSIPATSDFPT ILSYTIHLKAEDTAKLMESYKENEYRGTAEQFENLFKNKHFYPGLLAELSQFYHKERLYL LHSIEFLIKKAYSNAHPYSNIFKNFLETYDGKCELKKSLLAQLKLLSKGSAPQQSAIVTP AIIKSWWSLNSQEILLVLQCLIYYSESHELDAEDLLEILSTCGQLSGDLGENFHSVCHMQ TTLLVKIVQPKDNFQTLRLKNTAIEEQLERLLNKAEYSPILLAWMLNHYTSENPISGSKF QQFGKKAIEQRVLKIIGDISSDPIFQGESSLREIVCRTMNGLLAVLVSCFDTERLGNQAD LRRATCCILRGSSQAAKNVWLPDQGLNFVWSETVSQFPLEMVALLELSRAVAHSSKENKF RICQEVQQLPNFMELIENIPESWLKWTTAGVVVLLQTYYPYKTAGCKEILIPRGAVGSID GKYIRWQVKVNLYEIAIAEIKMLLQQGSFGLSAVKVDSLTRVQHVLGFLELIFPQLEMSS PAYAEKFRHHILSLVEKFGPLSTATQELVASSLKCLAAAVTESNASEVAGKIFSTSILPS VERHLPTGVGNEISPGVIGIVLAGIESSQGSYPLTVAFVKLTSAFIQANLADERVSVASS LFIFREVLPFLLTRQYVSIEQREIMIGVTLNWLHVLLQTDSSNQVRQICTRTLLNSPRGE TESLVAIAAFGSSLAEMQLMKQSDWDDRDGHGLVMLRHIRLSLSILNLLLKDREAAGHMS PLESLLSSPSSAPTGQHFTTILAHYIFYRFDLRLATLALKVLKSCANRWKNVSLLACLGH DAPLIRNTWLNSLESTLEDAGLIRTILRLMTESVAAQPGLMHMLVNGDDRCFRAVARLLL EENELEALELVHQFWFQRCSPAIEYFKRRPKFWQQLCLPLHSADKNPEVKRIALLFQILA IELYNTCGKVNSELQDVLNQLPSHLTDWSDLVLKSLPPSSSPAGQEKTGVELLLSGWSDF LVMLAHYGPEIDAGNRAKISTDVLEALIGRAESGHRSPLLGKLAELNWMLQLVEKKSNDR LLTSLGQLLDVIAEKELTSFPARFQVAVLTSAVSALRLRGRTDKDEKLADWMRPVSLCTQ SCLIQLPQLLLTDATNPNSRATCITALCLSLLTELIPSAIDLSALQETFLLQSLISTIQF CIHHRQGWDVAEGALSVLLAVARTDAGSAVLTQLQLDQTLWLPLEVIYEAQPMVYRLGLQ LCTTVLGRQRHFFLEQALTLAGVHQQPFTNILLKLRHPNKDDLIVATDVMALLRQLSVFQ QTWRLQHSGSMQNVLQAASSAVYFGIAHLIRASSITPLISTSFGEGKDNETVQPSAAALE LQSKLLELVSQGLALLNCYNPPLAALLTEDGIDVAKWERHLSPSFSTPSLDHLEASPSLS FGTLNAVASHTLRILSKPDQQPNERNHLTLVLEQSLSLLLSQALLYILDPRLCPQEKQLL KRELGAELGSFVESIRRQAQRGLRSPATASYTPRPIISTVNQSFLKLVGHIVQRIFK NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atggaaaagaccaaacacatgaagacattatggtctattttatcgggtaccaaccagccg ttgtcatttgatgttgtcggacctttcatagaaagtgccaaaaattggctagtctctgga attcaacatttcaggcctagggatgaagattctattccagcgacaagtgattttcctaca attctcagttatactatacacctgaaagcagaggatacagcaaagttgatggaaagctac aaagaaaatgaatatagaggaactgcagaacagtttgaaaacctctttaaaaacaagcat ttttaccctgggcttttggctgaactcagtcagttttaccataaagaaagactctatctt ctacatagcattgagttcctcataaaaaaggcttacagcaatgcacatccatactccaac attttcaagaacttcttggaaacctatgatggaaaatgtgaacttaagaaatctcttttg gcacagctgaagttgctcagtaaaggatctgctccacagcagtcagcaattgttacacct gcaataatcaagtcgtggtggagcttgaattctcaggagattcttttagttctccagtgc ctgatatactattcagagagtcacgaattagatgctgaagaccttcttgaaattttgtca acctgtggccaactctctggtgatttgggagaaaatttccatagtgtctgccacatgcaa accacactacttgtgaaaattgttcagcccaaagacaatttccaaactttaaggttgaag aacacagcaattgaagagcaattggaaagacttttgaacaaagcagagtactctcctatt cttctggcatggatgttaaatcactatacttccgaaaaccctatcagtggttccaaattc caacagttcggcaaaaaagcgatcgaacaacgagtactaaagatcattggtgacatcagt agtgatcccattttccagggtgaatcgtctctccgagagatagtttgtcgaacaatgaat ggtctcctcgccgtcttggtgagctgtttcgacacagaaaggctaggtaatcaggcagat ttacggagagcaacctgttgtatactgcgtggaagttcacaagctgccaaaaatgtctgg ctacctgatcaaggactcaactttgtctggagtgaaactgtgagccaatttcctttagaa atggttgccctgttggagctttccagggctgttgcacattcttcaaaggaaaataaattt aggatctgtcaagaagtccagcaacttcctaatttcatggaactgattgaaaacatccca gaatcttggctaaaatggacgacagctggagtggttgtcttgctccaaacttactaccca tacaaaactgctggctgtaaagagatcctgataccacgtggagctgtaggcagtatcgat ggcaaatatatccgatggcaagtgaaggtcaacctgtacgaaatcgccattgcagagatt aagatgcttctccagcagggatctttcggattgtcggctgtcaaagtagactcattgacg cgagtacaacacgtactgggcttcctagaattgatttttccccaacttgaaatgtcctcg ccggcttacgctgaaaaatttcgacatcatatcttgtcattagtggaaaagtttggtcca ctctcaactgccacgcaggagttagttgccagttccctgaaatgcctcgccgctgccgtc acagagtcaaacgcgtctgaagtagcaggaaaaatattcagcacttccatccttccttca gttgaacgtcatctgccgactggtgttgggaacgaaatctcgcctggagtaattggcatt gtattggccggtattgaaagctcgcagggatcgtaccctttaaccgtcgctttcgtcaag ctaacttctgccttcattcaggcgaacttggcagacgagcgggtttccgtagcgtccagc ttgtttatctttcgtgaggttttacctttcttactgactcgtcagtacgtcagtatagaa caacgagaaataatgattggcgtaaccctcaattggcttcacgttcttttacaaacggat tcgtcaaaccaagtgcgccaaatatgcacccgaacattgctcaattcacccaggggagaa acagagagtctcgtggctattgcagcctttggttcatcgttggctgaaatgcagttgatg aaacaatcagattgggatgatcgagatgggcatggacttgttatgctgcgccacattcgt ttgtcactttccattctcaatcttttactcaaagatcgtgaagctgctggacatatgtcc cctctagagtctttgttgtcgagtccaagcagcgctccaaccggtcaacattttactacc atattggcccattacatcttttatcgctttgatttgcggctggccaccttggcactgaaa gttttgaaatcgtgtgccaatcgatggaagaatgtttctctactggcctgtctcggacac gacgcaccactcatacgcaacacttggctgaattcccttgagtcgactttggaagacgct ggactgatccgcaccattctccggttaatgacagaatctgtggctgcccaaccgggattg atgcatatgctggtcaacggtgatgatcgttgctttagggccgttgcgcgtttgctatta gaggagaacgaattagaagctctggaacttgtgcatcaattttggttccagcgatgctcg cctgctattgaatacttcaagagacggccgaaattctggcagcaactttgtttgcctctt cattctgctgacaagaaccctgaagtcaaacggatagctctgcttttccaaatcttggct atcgaactctacaacacgtgcggcaaagtcaattccgaattgcaggatgtcctcaaccaa ttgccctctcatttgacagactggtctgatttagtactcaaaagtctaccgccatcctcc tcacctgccggacaagaaaaaacaggcgtggaattgctcctttcggggtggtcggatttc cttgtgatgttggctcattatggtccagaaatagatgctggaaatcgtgccaaaatctcc actgatgtattggaagccctcattggacgggccgagagcggacaccgttctccactatta ggaaaattagccgaactaaactggatgttgcagttggttgagaaaaaaagcaacgataga ttattgactagcctaggtcaactactggatgtaatagcagagaaagaattgacttcattt cctgcccggtttcaagttgccgtcctcaccagtgctgtctccgctttgcgtttacgaggc cgaactgataaagatgaaaaattagctgactggatgcgcccagtgtctctttgtacccag tcctgtcttattcaactaccccagctcttacttacggatgccaccaatcccaattcgaga gcgacttgcatcactgccctttgtctatcgctgctgactgaattgattccttccgccatt gacttgtccgccttgcaggagaccttccttctccaatcgttaatatctacgatacagttc tgtatccatcatcgacaaggctgggatgtggctgaaggggccttatcggtgcttctcgct gtggcgagaacagatgcaggcagtgcggttttgactcagcttcaactagatcaaacgctt tggctacctttagaggtgatttacgaagctcagcctatggtgtaccgattaggtctacaa ctatgcacaaccgtgctaggtcgacagcgacattttttcttggaacaagcactgacattg gctggcgtccaccagcagccttttaccaacatcctgctcaaacttcgccatccaaataaa gatgatctcatcgtcgccaccgacgtcatggctctacttcgacagctatctgtcttccag caaacatggcggttacaacattctggctcaatgcagaacgttcttcaggccgcttcttcg gccgtatattttggcatagctcacctcatccgagctagcagcatcactcctctaatcagc actagctttggagaagggaaagataatgaaaccgttcaaccatctgctgctgctctggaa cttcagtccaaattattggaattagtttcgcaaggattggctttactgaactgctacaat ccacccctggctgccctgttgacagaagacgggatcgatgtagctaaatgggaacggcat ttgagtcctagcttcagcacaccgtctttggatcatttggaggcttccccttcattgagt tttggcacattaaatgctgttgcttctcataccttaagaatactgtccaaaccggatcaa cagccgaatgagaggaatcatttaactttagtactggaacaatccctatcattgctcctg tctcaagctctgttgtacatcctcgacccacgtctgtgcccccaagaaaaacaactgctc aagcgagagcttggtgccgagctgggcagctttgttgaatcgataagacggcaggcgcaa aggggtctaagatctccggccactgcgtcctatactcctcggcctatcatttcaacagta aatcaaagtttccttaaacttgtggggcatatcgttcaacgtatcttcaaatag

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