Daphnia magna (water flea): 116925897
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Entry
116925897 CDS
T07514
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00061
Fatty acid biosynthesis
dmk00071
Fatty acid degradation
dmk01100
Metabolic pathways
dmk01212
Fatty acid metabolism
dmk04146
Peroxisome
Module
dmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116925897
00071 Fatty acid degradation
116925897
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116925897
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dmk01004
]
116925897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116925897
Enzymes [BR:
dmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116925897
Lipid biosynthesis proteins [BR:
dmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116925897
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
116925897
Exosomal proteins of breast cancer cells
116925897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
116925897
NCBI-ProteinID:
XP_032788547
LinkDB
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Position
LG6:complement(6597230..6601393)
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AA seq
709 aa
AA seq
DB search
MISFKMPIETAFLFLIQCVLHLYTIITWPIYFLVQKPWKAKANHNKLKSVALMQGDDFVL
HRSVSQISEVHVRFIQDNIDTMEKVFRFSVRQHGQKAALGTREILAEEDEIQPNGRVFKK
FVLGSYQWRSFTQMENEAESFGRGLRELGINAKENVVLFAETRAEWLIASNGCMKQNMPL
VTLYATLGEDALIHGINETEVSCVVTSQELLPKFKNILPCTPNVMVLVVFEDAIKPLDFS
GYGDLVKILPYREVIRLGEMSSKTGLLPKPEDTAIVMYTSGSTGPPKGVLMSHENVMSSM
LAYTNVAEIFEHDVYMAYLPLAHVLELIGESMCLLYGIPIGYSNPLTMTDKSSKIKRGSK
GDASVLRPTIIACVPLILDRIYKSIQEKVENGSTMKKILFNLAMQYKLDWFQQGYDTPII
NSLMFRPIRAILGGRIRFILAGGAPLAPETHRCLRAALCCPVLQGYGLTETCSATTMMDM
DDRSTGMTGGPLTCCDIKLVNWEEGNYRVKDRPYPRGEIHVGGPNVAVGYYKQPQKTAEE
FYEENGRHWFRTGDIGEFGPEGNLKIVDRKKDLVKLQLGEYVSLGKVESELKTCPLIDNL
CVYADPTKMFVVALVMPNLDHLKTIALKSGIAWENIEEICLNNFVENSFLTEIQKYALKC
RLQKFEIPQALKLVSEVWTPDMGLVTAAFKLKRKNIQDRYQLLIDRMYS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgataagctttaaaatgcctattgaaacagcatttttgttccttatccaatgtgtactg
catttatacacaatcatcacatggccaatctattttctagtccaaaaaccatggaaagct
aaagctaatcacaacaaattaaagtcagtagcattgatgcagggtgatgattttgtctta
catcgaagtgtatctcaaatcagtgaagttcatgtcagattcattcaagataatattgac
accatggaaaaagtattcagattttctgttcgccaacatggacagaaagcagcacttggt
acaagggaaattttagctgaagaagatgagattcaacccaatggtagagttttcaaaaag
tttgtattgggaagctatcaatggagaagtttcacacaaatggaaaatgaagcagaaagc
tttggccgtggccttcgtgaattgggtatcaatgcaaaagaaaatgtcgttttatttgcc
gaaacgcgagccgagtggcttattgcttcgaatggctgcatgaagcaaaatatgcctcta
gtaactttgtacgcaacactgggagaagatgcattgatccatggtatcaatgaaactgaa
gtttcgtgtgtcgttacgtcacaagaattattaccgaaattcaaaaacattctgccctgc
acaccaaacgtcatggttctggttgtctttgaggatgctataaagccgctagatttttcc
ggctatggagatttagtaaaaattcttccttatcgtgaagttataagattaggggagatg
tcaagtaaaacggggttattaccaaaacctgaggatacggccatcgttatgtacaccagt
ggctctacaggtccaccaaagggagttctgatgagtcatgaaaatgtgatgagctccatg
ttagcatatacaaatgttgccgaaatttttgaacatgatgtgtatatggcgtatttgcca
ctggcacatgttcttgaacttattggggagagtatgtgtctcttgtacggcattccaatt
ggctactccaatcccctaactatgaccgacaagtcaagcaaaatcaaacgagggagcaaa
ggcgatgcttccgtgttaaggcctactataatcgcatgcgttccgcttatcctcgaccgc
atttacaaaagcattcaagaaaaagtagaaaatggttcgaccatgaaaaaaattctcttt
aatctagcaatgcagtacaagcttgactggttccaacaaggatatgacacacccattatc
aattcattgatgtttcgacccattcgagcaattttagggggacgtatacggttcattctg
gctggaggtgctcccctggcccccgaaactcatagatgtttgagagctgccctttgctgc
cctgttcttcagggatatggtttgacggaaacgtgttcagcgactacaatgatggatatg
gatgatcgatcaaccggaatgactggtgggccgttgacctgctgtgatatcaaattggta
aattgggaagaaggcaattacagggtgaaagaccgaccctatccacgtggggagattcat
gtcggtggaccaaacgtcgcagttggttattacaaacaaccacaaaaaacagcggaagaa
ttctacgaagaaaacggtaggcattggtttcgcacgggggacattggcgaattcggaccg
gaaggaaatttgaaaatcgtcgatcgcaaaaaggacttagtaaagctacaactaggcgaa
tatgtctccttgggtaaggttgaatctgaactgaaaacctgtcccttaatagacaattta
tgcgtgtacgcagatcctaccaagatgtttgttgtcgcgttagttatgccaaacctggat
catttgaagacaatcgccttgaaaagtggcatagcgtgggaaaatattgaagaaatttgc
cttaacaatttcgttgaaaactctttcctcactgaaattcaaaagtatgctttgaaatgc
cgtctgcaaaagtttgaaattccacaggcgcttaagcttgtctcagaagtttggacgcca
gacatggggcttgttacagccgcatttaagctgaaaagaaaaaatatccaagatcgttat
cagttgttgatcgatcgaatgtattcgtag
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