Daphnia magna (water flea): 116926035
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Entry
116926035 CDS
T07514
Name
(RefSeq) protein retinal degeneration B isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116926035
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116926035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IP_trans
LNS2_PITM1-3
PITM1-3
DDHD
LNS2
Acid_phosphat_B
Hydrolase
Motif
Other DBs
NCBI-GeneID:
116926035
NCBI-ProteinID:
XP_045032291
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Position
LG7:complement(13433567..13440617)
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AA seq
1322 aa
AA seq
DB search
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESCGEGSGVEILVNEPYAEGPGGAGQYTH
KIFHVGSHLPGWLKALLPKSAFIVEEKAWNAYPYTRTRYTCPFIEKFSLDIETVYREDCG
DVENVFKLSKSELNDRAVDLIDVVKDQLPTASDYIKEEDPCVYVSRKTGRGPLSDSWIQD
YWRECKGQKLPLSNGKAIMCAYKLCRVEFKYWGMQAKIERFIHDIALRKTMVRAHRQAWT
WQDEWFNLTMDDIRELERQTQEALAKKMASATTTTSDGGLEQQQYEEQKNNSVIPSSMVP
ASPNISGEETVDKGSQPVVAAVPQGVVATTSWPMSCISESSSDDDEFFDCQDWRSGQAGG
ALSPTMVRWSSMELVPQGEDADELLDPADRIQDERIEFRSLFQERDSIFSAGYLQRHANQ
RRPSRKLVNNFLRASGSGRSQSPSSTAGGTSSQQTHPASALILVFHGGTVLDVSSELANK
AADLATFRSNLEAVIRQHFPSLCSGRLAVRLVSCPTLCPDAITVLNSLSCSSSSMLEQGG
SSAVPPPPDASHPMMATSDSTAADPSVPVSSVPASATSCWPPLGCLPLFAASSPEYADTV
NRTIMAANLAYSEFLKSPEGSGFSGSVAVVADAAGSVLLYDALCKSSSSSDCHDGGVGDI
HSHFGGSDNSIAEEPDQLQHSPGVVFEEDKKTDHFSLGISASFKNTRTHHLQAPSNRRAS
SASAGEQGPGRCISTTSKNYLDFEVGDCFLLGSPLALVLAFRKWSHSHGQHWPRRPHCHG
IYNLFHSMDPLSARLEPLLSARFANTRPVSVPRYQRYPLGDGKSANLIDFFQNNPQLFQE
STASPHHQHHQMLDNNGLSKRRQSDGSFVHGSNNSLGSDSLAAQMSSLSQRWWGSKRLDY
VFYCPDGLTSFPPSALPHLLHASFWESADVAAFILRQLMRLDGSVGGGGSAGSDDYYSDI
RDANGGSLPFSPSTPCEKWMRKRTSVKIKNIGANHRANDIIVNETMPQVIVARFMYGPLD
MVALTGEKVDIHFLRDANNSEWDLIATEVTDKTGRLVCTLPPDRSLPLGLHPIKMVVRGD
HTYADLYVAVLPARTQAVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRHWQELGYLIIYT
TGRPDMQQRRVVSWLAQHNFPHGLLSFADGLSTDPLRHKADYLKLLINDVGLEIRAAYGS
SKDISVYTSVGIKPENIYIVGKVSRKHQGQAQSLIEGYASHLSNLALHQCRPAQINPYLL
LPRGCLSLPGHGAPLLRRRSAKRATSFPISTVVTGVIYTTSSTATMVATTAVTNAPTLAK
SS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgttgattaaagaatatagaatacccttgcctcttactgttgaagagtacaggattgcc
caactctacatgatagctaagaaaagcagagaagagagctgtggcgaaggcagtggggtt
gagattttagtcaatgaaccctacgctgaaggcccaggtggggcgggacaatatactcac
aaaatcttccatgttggcagtcatctgcctggttggctcaaggctctgttgcccaaatct
gccttcatcgtggaggagaaggcctggaatgcctatccctacaccagaactcgctacacc
tgtccttttattgaaaagtttagtctggacattgaaactgtctaccgtgaggattgcggt
gacgttgaaaacgtctttaaacttagtaaatcggagctgaacgatcgagccgtcgatttg
attgatgtagtgaaagatcaactgcccacagctagcgattacatcaaagaagaagatccc
tgcgtctacgttagccgcaaaacgggcagggggcctttaagtgattcttggattcaggac
tactggcgcgaatgcaagggccaaaaattgcctctgtcgaatggcaaggcaatcatgtgc
gcctacaaactatgccgagttgaattcaagtactggggaatgcaggccaagatcgaacgg
ttcatccacgacattgctctaaggaaaacgatggtgcgagctcatagacaggcgtggact
tggcaggatgaatggttcaacctaacaatggatgacatccgcgaactggaaagacaaacg
caggaggcgttggccaagaaaatggcgtcagcgacgaccacgaccagtgatggtggactg
gaacaacagcaatacgaggagcaaaagaataatagtgtcataccatcaagtatggtgcca
gcatccccaaacatcagcggggaagaaactgtggacaagggcagccagccggtagttgca
gcggtaccacagggagttgttgccaccacatcatggcccatgtcttgcatttccgagtcg
agcagcgatgacgacgagttctttgattgccaagactggcgttccggtcaggcaggagga
gctctgtcgcctaccatggttcgttggagctcgatggaattggttccgcaaggcgaagat
gctgacgagttgctggatccggccgacagaatccaggacgaacgaatcgaatttcgctcg
ttgtttcaggaaagagacagtatcttctctgctggttacttgcaacgacatgccaatcaa
cgccgtccgtctcgtaaactcgtcaacaattttttacgagccagcggaagtggccgttct
caatcgcctagtagcaccgcaggggggacgtcgtcacaacaaactcatcctgccagtgct
ctcattttagtgtttcatgggggcaccgtgctggacgtctcatccgaactggccaataaa
gccgccgatttggccacgttccgcagcaatttagaggccgtcatccgccaacatttcccc
agtttatgctcgggtcgtctggccgtccgtctcgtctcgtgccccacattgtgcccagat
gcaatcaccgtcctcaacagtttgtcttgctcttcttcctcgatgttagaacaaggtgga
tcgtcagctgttccacctccgccagacgcttctcatccgatgatggccacgtcggattcg
acggcagctgatccttccgttccagttagtagtgttccagcttccgccaccagctgctgg
ccaccccttgggtgtttgccactgttcgccgcctcgtcgccggaatatgccgacacagtc
aaccggacgattatggcggccaatcttgcctattcagagttcctcaaatcgccggaaggt
agcggcttctccggctcagtagccgtggtagctgacgcggctggatccgtcctcctttat
gacgccctttgtaaatcttcgtcatcatccgattgtcacgacggcggagttggcgacatt
cactcgcatttcggtggcagcgacaacagcatagcggaagaacccgatcaactgcaacac
agtccaggagtggttttcgaagaggataagaaaaccgaccacttctcccttggcatatcc
gcctcctttaagaatacgagaactcatcatctgcaagcgccaagcaatcgccgggcgtcg
tccgcctctgccggtgaacagggtccaggccgttgtatttcaactactagcaaaaattac
ctagattttgaagttggagactgttttctactaggcagccctctcgcactggtcttggct
ttccggaagtggagtcatagtcatggccaacattggccccgccgtccgcattgtcacggc
atttataatttattccattcaatggatcctctttcggctcgtctggagccgcttctatcg
gcccgttttgcaaatactcgacccgtctctgttccccgttatcaacgctatccgctaggc
gatggcaaatccgccaatttgatcgatttttttcaaaacaatcctcaattgtttcaagaa
tcgactgcgtcaccccaccaccaacatcaccagatgctcgataacaacggattaagcaaa
cgacggcaatcggatggatcctttgtccacggaagtaacaatagtctcggatcagattct
ctggcagctcaaatgtcatcactttcgcagcgctggtggggtagtaaacgactggactac
gttttctactgcccggatggtttgacttctttcccgccttccgcgctgcctcatttactt
cacgcttccttctgggagtctgccgatgtagcggcttttatccttcgccaattgatgaga
ctggacggaagcgttgggggaggaggttcggctggatctgacgattattacagtgacata
agggacgccaatggtggatcgttgccgttcagtccttccaccccatgcgagaaatggatg
cgcaaacgaacgtcggtgaaaattaagaatatcggtgccaatcatcgagcaaacgatatc
attgtcaacgaaacgatgcctcaggttattgtagccaggtttatgtacgggccgctggat
atggtggcgttgactggcgagaaagtggacattcactttttgcgggatgcaaataatagc
gaatgggacctcatcgccacggaagtgacggacaagactggtcgattggtctgcactttg
ccgccggatcgtagtctgccgcttggactgcatcccatcaaaatggttgtccgcggtgac
cacacctacgccgatctgtacgtggccgttttacctgcgcggacgcaggctgttgtcttc
agcatcgacggatcgtttacggcgtcggtgtcggtgactggccgcgatcccaaggtgcgg
gctggtgccgtggacgttgtgcgacattggcaagagctgggctacctgatcatttacacg
actgggcgaccggacatgcagcagcgtcgagtggtctcttggctggcgcagcacaacttc
cctcacggcctgttgtcctttgccgatggcttgagcaccgatccgctgcgccacaaggcc
gactacctcaagttgttgatcaatgacgttggattggaaatcagggcagcctatggatcc
agcaaagatattagcgtctatacgagcgtcggtatcaaaccggagaacatttacattgtg
ggaaaagtatcacggaaacatcagggccaagcccagtctcttattgaaggttatgccagc
catttgtcaaatttggctctacatcaatgccggccagctcagatcaatccttatctcttg
ctacccagaggttgcctgtctctacccggccacggagccccccttttacgtcgaagatcg
gctaaacgtgcaacatcatttccgatctcgacggtcgtcactggagttatttacacaacg
tcatcgacagcgaccatggtggcgacaacagccgtcaccaatgctccaacgctggccaaa
tccagctga
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