Daphnia magna (water flea): 116926038
Help
Entry
116926038 CDS
T07514
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmk01009
]
116926038
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116926038
03041 Spliceosome [BR:
dmk03041
]
116926038
Protein phosphatases and associated proteins [BR:
dmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116926038
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116926038
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116926038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
RRM_1
PWI
zf-CCCH
zf_CCCH_4
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
116926038
NCBI-ProteinID:
XP_032788701
LinkDB
All DBs
Position
LG7:13470414..13474751
Genome browser
AA seq
992 aa
AA seq
DB search
MIIENPEALKSWLTAVLAPLCDADPAALAKYVLALAKKEKPESELRGAMCDQLDVFLQQE
TKGFVDKLFVTLETKSYLQSNPEPPSTQPESASSTTEQANTGVTNGQNLVIPPVSVPVVP
LPVPVLSATSADSRTKKSSSDRTKRRSWSPRSRSRSRSRDRDRDRPVRRSRSRDRSTRDH
RGGRSTWDDRRPSRRSPVNSRRSDRRRSRSPLPPRRSSRSPRSSRRQRSPIPPPPIVAGL
ENVAVAPVLVPTGVAGTDPAIVVGLPVPPAAIQSVVVAPPAAVPQQQLERGPKFRCRDYD
EKGYCMRGDLCPYDHGTDPVVLEDVELSSVLNYNRPPPPVGATGSSGAPPGPLPVGPPPH
LRGPPPSLPPSGEPYNPDAPGISWPPPPLVGLRPLGPPPPFGHPPSHRLPPPHMRIRGPL
PPRGPPPMGLLGSAPPPRELINVPTAEDGIDAGVKRTVREAGLDSDGHLVKKGHFDYNRL
GNPPVQQQQQQQQQQTGQANHGQPPQQRRFDPTNCCLEVKKIPRGLNNISVLNNHFSKFG
KIINLQVSYNGDSEGALVTFSSHAEAQAAYRSTEAVLNNRFIKVFWHNKEMSSPEMKGKQ
ENVPPTSKVPIRERLGGAHPQRVLAQSQTSAAIVDEVAIKEASEAKEKEREKAVAAIKRS
QEILAAKEALKKKQEEQKREATKLQVDLQRRKQELLDKQLQQQRVLIERLEKNKNTIKTD
ERAAVMQTVRNLQETIEKLKKDLQTTNPSHGHAANAPSVGAPAHLAKTPEEAKKEILDVE
IELYQKQMEGSDTTELQRRVQELNSIISQSHRGHPSNRRGARISSRGTLRGRGRGLAARL
SARGRGRGGYYVGPHVSVDRRPTQLKATGFEIHQQGDILAHFANFGEVVDYHVDEDYPAL
TIRYKSRKDAEMALAQGRSFTGANLSVSWHMPPGSVPKVKDHVAAEEEDEHSGNRIEGSA
SAEEDDEEENEGLDDLLNYEEDDEDEERSWRR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgattattgagaaccctgaagctctaaagtcatggctcactgctgtactggctcccttg
tgtgatgcagatcctgcagcacttgccaagtatgtgcttgccttggcaaaaaaggagaaa
cccgaatctgagttgcgtggagccatgtgtgatcagttggatgtattcctgcagcaagaa
accaaagggtttgtcgacaaattattcgtcactttggagaccaaatcgtacctgcagtca
aatcccgaacccccgtcgacacaaccagaatctgcctcctccaccaccgaacaggccaat
acaggcgttactaacggccaaaatttagtcattccaccagtctcggtcccggtagtgcca
cttcctgttcccgtcctttcggctacgtcagccgattcgaggaccaaaaaatcatcgtca
gatcgtaccaagaggagatcctggagtcccaggtcccggtcacggtcccgcagtcgggat
cgtgatcgggatcggccagtgcgacgttctagatcacgtgatcgatcaactcgcgatcat
agaggtggtcgcagtacgtgggatgaccgtcgaccgagccgacggagtcccgtcaacagc
aggcgatcggaccggagacgctctcgttctcccttgccacctcggcgttcgtctcgtagc
ccacgcagctcacgtcgtcaacgttctccgattcctccaccccccatcgttgctggattg
gaaaacgtggctgttgctcccgttctcgtacctaccggagttgctggtaccgatccagct
attgtggtgggattgcctgttcctcctgcagccattcaaagcgtcgtggtggccccaccg
gcggctgttccgcagcaacagctcgaacgggggccaaagtttcgatgccgtgattacgac
gagaaaggttactgcatgcgtggtgatctctgcccatacgatcatggcaccgatccggtc
gtcctggaagatgtcgagctgtcatctgtcttgaactataatcgacctccacctccagtg
ggggccactggaagtagcggtgctccccctgggccactacccgttggtcctccacctcat
cttcgcggaccacctcctagtctgcccccgtctggagaaccatacaatcctgatgcacct
ggcatcagctggcctccgccgcccttggttggtctgcgtccgctgggtccaccacccccg
tttggccacccaccttcgcatcgcctcccaccgccacacatgagaatccgagggccgttg
ccaccacgtggtccaccaccgatgggcctactaggttctgcccctcctcctagagaacta
ataaatgtgcctactgccgaggatggaatcgatgccggtgtaaagaggaccgttagagaa
gctggacttgattccgatggacatcttgtcaagaagggccactttgattacaaccgtttg
ggtaatccgccagttcagcagcagcagcagcagcaacaacaacagactggacaggccaat
catggacagccaccgcagcagcgtcgcttcgatcccacgaattgctgcctggaagtgaaa
aagattcctcgcggactgaacaacatttcagttctcaacaatcattttagcaaatttggc
aaaattatcaatttgcaagtgtcttacaatggagattcggaaggtgccctggtgacgttc
tcttctcacgccgaggctcaggcagcctaccggagtaccgaggccgtcttaaacaaccgc
ttcatcaaagtgttttggcacaacaaagaaatgagttcgcccgaaatgaagggcaagcag
gagaacgttccccccacctctaaggttcccattagggagcggttaggaggagcacatcct
caacgagtgctagcccagtcgcaaacttcagctgcgatcgtcgatgaagtcgccatcaaa
gaagcttctgaagccaaggaaaaggaaagagagaaagctgttgcggccattaagaggagt
caagagatcctggccgccaaagaggcgctaaaaaagaagcaagaagagcaaaaaagggag
gctactaaattgcaggtggatctgcagcggcgcaagcaagagctattggacaagcaattg
cagcagcagcgcgtgttgattgaacgactggagaagaacaagaacacaataaagacggat
gagcgagctgccgtcatgcagacggtccgaaatctccaggaaacgatcgagaaactgaaa
aaagaccttcagacgacgaatccgagtcacggccatgccgccaacgctccttccgttgga
gcccctgctcacctagccaaaactcccgaagaagccaaaaaagaaatactggatgtagag
attgaactctatcagaagcagatggaaggaagcgacacgactgaattacagcgtcgagtc
caggaattgaactcgatcatcagtcagtcgcataggggccatccgagtaatagacgagga
gctaggatcagctctagaggcactcttcgaggcagaggtcgtggattggctgcaagatta
tcagctcgtggaaggggtcgaggtggttactatgttggcccgcacgtgtcggtggatcgc
agacctacccagctcaaagccactggcttcgaaattcaccagcaaggagacatacttgcc
cattttgccaactttggtgaagtagtggactaccacgtcgatgaagattatccagcgctg
acgattcgatacaagtcccggaaggatgccgaaatggctttggcccaagggcgaagtttc
acgggcgccaacctgtcagttagttggcacatgccacccggttctgtccctaaagtcaag
gatcatgtcgctgccgaagaagaagatgaacacagcggcaataggatcgagggatcggct
agtgccgaggaagacgatgaagaagaaaacgagggtctagatgatttgttgaattatgaa
gaggatgacgaagatgaagaacgctcctggaggcgatag
DBGET
integrated database retrieval system
