Daphnia magna (water flea): 116926301
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Entry
116926301 CDS
T07514
Name
(RefSeq) tetratricopeptide repeat protein 30A
KO
K19683
tetratricopeptide repeat protein 30
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmk03037
]
116926301
Cilium and associated proteins [BR:
dmk03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116926301
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
ARM_TT21_C
TPR_CcmH_CycH
ANAPC3
VMAP-M1
TPR_Slam
Fis1_TPR_C
DUF285
Motif
Other DBs
NCBI-GeneID:
116926301
NCBI-ProteinID:
XP_032789034
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All DBs
Position
LG7:11241136..11244201
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AA seq
675 aa
AA seq
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MAFNSIKDGEFTKTIYNMIKDERYHDAITTLVTIVDANPTSKAGLSLLGYCCFQIQDFFN
AASCYEQLYSLYSEQEEYKLYWAQSLYEAGLYGSSLKVCNQIVDPKLKGKVLKLEAAIRF
AEDDLAAAMNTVNACFALSSTNDVDTLVNMGCIRFKEEDYSRALVKFQSAVHVSGFEPQL
LYNVAVCHYKMKEYAPAIKSIADIIERGIRDHPELSVGMATEGLEVRSVGNTLALHKSAL
VEAFNLKAATEYQLKNFEGAKEALTDMPPRLESELDPVTLHNMALLTADANPSESFDKLQ
FLLLQQVTQMQQQLENPESRLTGAGPLVCPPETFANLLLLYCKYEYFDLAADLMAEHADL
TYKHLSPYVFDFLEALITQQTSPEEAFAKFDALCVRYGEMVRRTGTNLKEARRQQSSHAI
SAAGLAHEQAMETYLPVLMNQAKIYWDRENYVQVEKLFRQSAELCGDADVWRLNVAHTLF
MQENKFREATSFYEPLVKQNYDNILDVSAVVLANLCVCYLVTSQNEEAEELLRKLEKEEE
QKSLENPQSKFFHLSIVNLVIGTLYCSKGNYEFGISRVIKSLEPYHQKLGTDTWFYAKRC
LMSLLENMAKQVVVVKDSILDDILQFLDSCQFYGREVQTILENPTAVNLNVSSARFTVTY
EARIIKCLLLQIIRN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaatagcattaaagatggcgaatttacaaaaacgatttacaatatgatcaaa
gatgagcgatatcacgacgcaatcacgacccttgtcacaattgtggatgccaacccaaca
tcaaaagcaggactgtcattactaggatactgctgcttccaaatccaggatttcttcaat
gccgccagctgctatgaacaactgtacagtctttacagcgagcaagaagaatacaagctc
tactgggcccagtcgctctatgaagccggcctttatggaagctcgttgaaggtttgcaat
caaatcgtggatcctaaactcaagggcaaagttttgaagctagaggcagccattcgtttt
gctgaggatgatttggcagcagctatgaacaccgtaaacgcatgtttcgccttgagctcc
accaatgacgttgatacgctagtcaacatgggatgtatccgtttcaaagaggaagactat
tcaagagccttggtcaagttccaaagtgccgtgcatgtatcgggtttcgaaccccaattg
ctctacaatgtggcagtctgccattacaaaatgaaagaatacgcacccgccatcaagtct
atcgctgacattattgaacgagggattcgagatcacccggaattgagtgtaggcatggca
accgaaggattggaggttcggtcggttggtaacacgttagcgctacataaaagtgccctt
gttgaagcattcaatcttaaagctgctaccgagtatcaattaaagaattttgaaggagcc
aaagaagcgttgacagatatgccccctagattggaatcggaattagatccggtgacgtta
cacaacatggcgctattaacagctgatgctaatccaagtgaaagtttcgacaaacttcag
tttctcctcctacagcaagtaacacaaatgcaacagcaacttgaaaatccagagtcacga
ctgaccggtgccggaccattggtctgcccgcctgaaactttcgccaatctgcttctcctt
tactgcaaatacgaatatttcgacttggccgccgatttgatggccgaacacgcggatttg
acctacaaacacctcagtccgtacgtgtttgattttctcgaggcgctcatcactcagcaa
acgtcaccggaagaggcatttgccaagtttgatgccctttgtgttcgatacggggagatg
gttcgacgtacgggtacgaacttgaaagaagctcggcgacagcagagttcgcatgccatc
agtgcagctgggctcgcgcatgaacaagccatggagacttatttgcccgtcctgatgaat
caagcgaaaatctactgggacagagaaaactacgtccaagttgaaaaacttttcagacag
tcggcggagctctgtggcgatgccgatgtctggcgtttgaatgtagcccacactttgttc
atgcaagaaaacaagtttcgcgaggccaccagtttctatgagcccctggttaaacaaaat
tacgataatatcttggacgtcagtgccgtggtacttgccaatttatgcgtttgctatctt
gtcacgtcacaaaacgaagaagctgaagaacttcttaggaaactagagaaagaagaggag
cagaaaagtcttgaaaatccccaatccaaattctttcatttgtctatagttaatctggtt
attgggacactgtattgttccaaaggcaactacgagtttggcatctctcgcgtgatcaag
agtcttgaaccctatcatcagaagcttggaaccgatacctggttttacgccaagcgatgc
ctcatgtctctgctggagaatatggcaaaacaagttgtggtcgtcaaagattctattttg
gacgacatcctgcaattcctcgacagctgccagttttacggaagagaagtacaaacgatc
ctggaaaatccaacagctgtcaatttaaacgttagcagcgcccgatttactgtaacatac
gaagcaaggattattaaatgtctgttactgcagatcatccgaaactga
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