Daphnia magna (water flea): 116926341
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Entry
116926341 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116926341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116926341
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116926341
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Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
NPHI_C
Motif
Other DBs
NCBI-GeneID:
116926341
NCBI-ProteinID:
XP_045033329
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All DBs
Position
LG7:complement(11226274..11229548)
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AA seq
282 aa
AA seq
DB search
MDALGWLKVGSDGYAARFESDEENYVIYLTDMASLWCQQQTAAEIMKRCQDLNPLIESTS
KGLIRQLRAXCLANNPESHNLHVDSNNQTAILKIESRLESNIPFIWQFDLSLETADQFRS
FVIRPLLAMLSEAASIEDELCNIIRSKDKQIDDYKASGASVSRRHLETKEFNAEAFFAAR
PSRTIDESVKEDMTALFCRIVIRLKQLYSAIVKRILSQKVVPVLDESSEPTKSISEDIET
PRQSSPKVSEASRAENIRKRLLEEELNEMAKSVKNARIKKIL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcttggttggttgaaagttgggtctgatggatacgcagctcgtttcgaatcg
gacgaagagaattatgtaatctatctcaccgacatggcttcactttggtgtcaacaacaa
accgctgctgaaatcatgaaacgatgccaggatttaaacccattgattgagtcaacatca
aaaggtttgattcgacaacttcgcgctnnatgcttggctaataatcccgaaagtcacaat
cttcacgtggattccaataaccaaacagccattttgaaaattgagtctcgcttggagagt
aacattccttttatttggcaatttgatctgtcgctagaaacggctgatcagtttcgttcc
tttgtaattcgcccattgttggctatgctaagtgaagccgcaagtatcgaagacgagctt
tgcaacatcatcagaagcaaagataagcagattgatgactacaaagcctctggtgcatcc
gtatcccgacggcatttggaaaccaaagaattcaacgccgaggccttcttcgctgcacgt
ccatcgcgtacaatcgacgagagcgtcaaagaggatatgacagcactattttgtcggatc
gtcattagattaaaacagctgtattctgccattgtcaagaggattttatcacaaaaagta
gtgcctgttctagacgaatcatcagaaccaacaaaatcaatttcggaagacattgaaact
ccaagacagtcgtcaccaaaggtaagtgaagcaagccgagcagaaaacattagaaagcgg
ttactcgaggaagagctgaatgaaatggctaaaagcgtaaaaaatgccagaattaagaag
attttgtaa
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