Daphnia magna (water flea): 116926396
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Entry
116926396 CDS
T07514
Name
(RefSeq) helicase domino isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116926396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116926396
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116926396
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
116926396
NCBI-ProteinID:
XP_032789169
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All DBs
Position
LG7:complement(11689451..11694145)
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AA seq
952 aa
AA seq
DB search
MENTITKLKNDKSSFSSVLDKYSRLQNERTRSDNAYKDVRLSVNLLERFVHGESLNQVVI
TLYPGNEGYTLALKIHNTLENETARIPYEEDELLNCIESQQLPPVLVELLEEAEADVFYE
GCVFVEVKDLRNGLKQSWNVLLKPSPQTILADAQQICQEQGWGSEELIQLESILCMAMAE
PLCLNPNPSIGELAVNRDSTSKQLHSTALRRNRRKWCEGRKRKQIESSPSSNNDFKLHDF
LKKKSLLGRGIPPILQQPQQDKHGMPSSSSSTPSVQLDVSDVLRLAKPLERPKETGDCSM
IPCEEYLYETDRVNGRVYLVRLTIFQRPAIEEFLGQLYVDRDFRDGKLTGGASCMFTLGS
RIHVNRYIQQFTEIFTEEGRKSVKITHQVQGHPPRVMYTQSMREKERLREKEEKQQQLLL
LQQQQQQQQQQQQQQQQPTVVQQLPVNKDATETQPANTAPIPNKTENHQTSGTITKTALL
ESLKSGQVSPAIATLVSTLLSSNPQQQQQQQQQIRPAAAAVGLNANVVMANGHHHQVHQQ
QQSLLRTPAAVRPATAVTVASGPAGSGPNVQLVTQSFSLQQGQQPQLRPNTNVRPTALAA
LLTNSKVTTLPPNISPGKGKFVAIDGGVNGSAGASGGNTILMGQIVRPIASGGATPVLPS
YSQAIGQTTAGATVVRTIRPAIPASTAGVVRRTTEAVLVNGSGGTQRFSLTVPALSALLA
GTPSADSPGANNVASSQNSPTLLERLQQQSSPSKPMVHALNNNHHQMHTIKPGLNMSNNN
LNVQSINLTGVQGAVANLPTLQSIQVSIPGLAVPLSLSLAVSSSSGTTGSTTVTTAGMVG
NVRLTTTGSLAGTGQPISIPLSVLQQVLNRSIPNTSGSTGVQLMSSVANKDGTQPLKVAV
TTGASVAQLSSGGQSSGSLLAHQQLQMALQRQVQVQLQQKMAAKQKSKPPNS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataccatcaccaagctcaaaaatgacaagtcctctttttctagtgttttggat
aaatattcacggcttcagaacgaaaggacacgatctgacaatgcctacaaggatgtcagg
ttatctgtcaacctgttggaacgatttgtacatggggaatccctaaatcaagtagttatc
acactatacccagggaatgaaggctatacactagccttgaagatacataatactttggag
aatgaaactgcacgaattccttatgaagaagatgagctcctaaattgtatagaaagccaa
caacttccacctgtcttagttgagcttcttgaggaggcagaagctgatgttttctatgaa
ggttgtgtatttgtagaagtgaaagaccttcgaaatggtttgaagcaatcttggaatgta
ctacttaaaccttcccctcagactattttagctgatgcacagcagatctgccaggaacaa
ggttggggttcagaagaactgatccaattggaaagcatactgtgcatggctatggctgaa
ccattgtgcttgaaccccaatccttcaataggagaactggctgtgaacagagacagcaca
tctaagcaattacatagtacagccttacgtcgcaatagaaggaaatggtgtgaaggaagg
aagcggaagcagatcgagagtagcccaagttctaataacgattttaaacttcacgatttt
ctcaaaaagaaatctctgctgggacgaggcatacctccaatacttcagcaaccacaacaa
gataaacacggtatgccgtcatcatcctcctcaactccttccgtccaactggatgtttcg
gatgtcttaagattagcgaaacctctggaacgacccaaagaaactggcgattgttccatg
ataccctgtgaagagtacttgtacgagacggatcgggtaaatggtcgagtatatctagtt
cgtctaacgatattccagcggccagccattgaggagttcctcggtcaactttatgttgat
cgagatttccgggacggcaaattgacgggcggtgcatcttgcatgtttaccttgggttca
agaatacacgtcaatcgttacattcaacagttcacggaaatctttacggaggaaggccgc
aagtccgtcaagattactcatcaagttcaaggccatccacctcgggtcatgtatactcaa
agcatgcgagagaaggaacgacttagggaaaaagaagaaaaacagcaacagctgttacta
ctacaacaacaacagcagcagcagcagcaacaacagcaacagcaacagcaacctacagtc
gtccagcaattacctgttaataaagatgcaacagagactcaaccagcgaacacagcgcca
attccgaacaagacggagaaccaccaaacctcgggcaccattaccaaaacggccttacta
gaaagtctcaagtctggccaggtctcaccagccatagctactttagtttccaccctcctt
tcttcgaatcctcagcagcagcagcagcaacaacaacaaataaggcctgctgctgcagca
gttggcctcaacgccaatgttgtgatggccaacggtcatcaccatcaggtccatcagcag
caacaaagtttgcttagaaccccggctgctgtaagacctgcaacagccgttacagtggcg
tctgggcccgctggatcgggacccaatgtccagttggttacccagtcatttagcctacag
caaggccagcaaccgcagttgaggcccaatactaatgtgcgtcccaccgcattagccgcc
ctcttgacaaattcaaaagtgacgacattacctcctaacatatctccaggaaaggggaaa
ttcgtggctattgatggtggcgttaacggctcagctggcgccagcggagggaatactatt
ttaatgggtcaaattgtccgaccgatcgccagcggaggggcaactcctgttttaccttcg
tacagccaagccattggtcagacaactgccggagcgacggttgtccgaactatccgacct
gctatccctgcgtcaacggccggagtagtaaggcgtaccacggaagccgtcctagtaaat
ggatcagggggtacgcagaggtttagtttgactgtacctgccctttcggcattactagca
ggaacgccttcggccgatagtcccggtgctaataatgtggcttctagccagaattctcct
accctgcttgaacgactgcaacagcagtcttctcccagtaaaccgatggtccatgcctta
aataataatcatcatcaaatgcacactatcaagccaggcctgaacatgagcaataacaac
ctgaacgtgcaaagtattaacctaactggcgtgcaaggtgctgttgccaacctccccact
ctacaaagcatacaggtatcaattccaggattggccgtccctctctcactctccctagct
gttagttccagttcgggtacgacgggaagtacaaccgtgacaactgctgggatggtggga
aatgtgagactgacgactacgggaagtctcgctggtactggccaacccattagcatccca
ctatccgtcctccagcaggtgctcaaccgctcaattccgaacactagtggaagcacgggc
gtacaattaatgagcagcgttgctaacaaggatggaactcaacctcttaaggttgcagtt
acaactggtgctagcgtggctcaactgtcttccggtggacaaagttcagggtccttattg
gcccatcagcagttgcaaatggctctacaacgccaagtgcaggtgcaattgcagcaaaaa
atggccgccaaacagaagagtaaaccgcccaacagctaa
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