Daphnia magna (water flea): 116926401
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Entry
116926401 CDS
T07514
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116926401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116926401
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116926401
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116926401
NCBI-ProteinID:
XP_032789176
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Position
LG7:11657635..11661043
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AA seq
590 aa
AA seq
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MLPRARLAAERNTSTLTLAAPVSLPRRSNISRLNQWESPVKNPARCRVHWRCKWDFYVAI
FSFALDSASWTRLTSSCIQHGGAAYLLARMISIVFVGLPLLFFEISIGQLSGMGPLKFFG
INNLRPVFSGIGFFLMCSSVYKAISATASGMWPISKTIILMLGDDVKGINSTFDLQEDMY
GFTQLDALTVISLSITWVFAVLAVICGVKFISKVSYITSVVPVTLVAILVVRAIYSDPSQ
MYTGLAVILAPSWQKLLSVPLWITAIADTALSLNLGFGVITFLASLNTHKLDCLKSSIVL
VTCHTVTLGLMLVLSCSTVFLLSNRSEIILEAISTGVSEQHPPGEGWTIIFLVAVFLLNL
DALIFICNMLATSFSNLSWRPVLAVMVGAFLYVICLPMATQSRELYIATIETFTGCTLPL
AGIFLVLVATVSSMRPSSMVDMVEFAGQCKLAFRGQSYVFVAYNAVLPLMLLMCIVDAGV
RIADNTNVMAIVGQLLLCFPWVSILLTPFYLVARHYGHLSSTKKWRELWQKSDYEDWLYR
RPQLPVGASDDDCNSIYELPERVSSSRPVSTYYSSATILASDSAVYSAYY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaagggcgcgtctggctgccgagcgcaatacctcaacgttgacgctcgctgca
cctgtgtcactccctaggcgttcgaatattagtagactgaatcaatgggagtcacctgtg
aaaaatcccgcaagatgtagagtgcattggagatgcaaatgggatttttacgtcgccatc
ttcagttttgctttagattcggctagttggacgcgactgacatcatcatgcatccagcat
ggtggagccgcatatttattggccagaatgatttccattgtttttgtgggcttaccactt
ctcttttttgagataagcattggccaactcagtggcatgggcccactcaaattttttggc
atcaacaatctgagaccagttttttctggcattggatttttcctcatgtgtagcagtgtt
tacaaagctataagtgctactgcatcaggaatgtggccaatatccaaaacaatcatcctg
atgttgggtgacgatgtcaaaggcattaacagtacttttgacctgcaagaagatatgtat
ggttttactcagttggatgccttgacagttattagtttatcaattacctgggtgtttgca
gtccttgcagtcatttgtggagtaaaattcattagcaaggtttcttacattacttctgta
gtacctgtgacacttgtcgccatccttgtggttagggccatctattcagatccatcacaa
atgtatacaggattggcagtcatacttgcaccatcatggcaaaagttgctttcagtcccc
ttgtggataacagccattgctgatactgcactttcactgaatttgggctttggtgtcatt
acattcctggcaagtctgaacacacataaactggactgtcttaagtcaagcatagttctg
gtgacatgtcacactgttacccttggactgatgttagtgctgagctgctcaaccgtcttt
ctgttatctaatcgatcagaaattattctagaagcgatttctactggagtcagtgaacaa
catccgcccggtgaaggatggacgattatctttttggttgctgtttttctgttgaattta
gacgccttgatttttatctgcaacatgctggccacttccttttctaatttgagctggcga
ccagtgttggctgttatggttggcgctttcctctacgtcatttgcttacccatggccacg
caaagcagagagttatacatagccacgattgagaccttcaccggctgcacactaccgttg
gcaggtatcttcctcgtcctggtggccaccgtgtccagcatgagaccgagcagcatggta
gacatggtcgaatttgctggccaatgcaagctagccttccgaggtcaaagttacgtcttt
gtcgcatacaacgcagtcctaccgctgatgttgctcatgtgcatcgttgacgctggcgtg
cgaatagccgacaacaccaacgtaatggccatcgtgggccaattgctgttatgcttcccc
tgggtttcgatcctgctgactccgttctacttggtcgcccgtcattacggccacttgtcc
agcaccaagaagtggcgagagttatggcaaaagtcagactatgaggactggctgtatcgg
cgtccgcagcttccggttggcgcatccgacgacgactgcaattccatctacgaattgccg
gaacgcgtgtccagcagccgacccgtttccacttactattcaagcgccactatactagcc
agcgactcggctgtctattccgcttattattga
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