Daphnia magna (water flea): 116926493
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Entry
116926493 CDS
T07514
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116926493
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
116926493
TFIIIC, fungi type
116926493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_1
TPR_CcmH_CycH
TPR_11
TPR_19
TPR_17
TPR_16
ANAPC3
TPR_Slam
HAT_PRP39_C
ARM_TT21_4th
BTAD
TPR_21
Motif
Other DBs
NCBI-GeneID:
116926493
NCBI-ProteinID:
XP_045031845
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All DBs
Position
LG7:complement(12168101..12172200)
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AA seq
928 aa
AA seq
DB search
MEDREDQEHPIPQVQVVASCDSSGVTLINEDTPLNLAENGLYEISYINIAEEDMVSELEL
LDTVTNDDDSSRQSFPENFEVEDADDSDDGEPNADEEQVAMTNDFLSGKISFQDFITRVE
CSDDSQSSGEDYSDIDDEEQVLEENKSDPEYIPEGLSKRQTNLHRKSEGRKEIITAPKGN
IAVASYTPQPSPASPLKRKKATTRVMKRLPSNLLGLMGEANLRYARNEKQDAINLCMEVI
RQAPNYAEPFQALSMFYEDLGDYEKSYQLSLIAAYLSPQDADEWIRLAEVCLSRNDELQA
SKCLAKAVQADPSNIQIHQNRCELLESMGAQKDLLKACLTMLRCVQPENEQKRNEWVELA
VRIARMHHASGHLHSARRALSNALVTCSASFTMEHYNLLLELQVLTKHYLDVMKVLTKHC
GLVFNNKIFDAIDLEEAETMELTQELPLDILSKLCIALVYSKKHDFAFPLIETFLEYDVE
SFGDIYLDVAEALVENEFHQRALPLLEALTKSQSFCLAAVWLKYANSLSALDRADEAIVA
FRHVIHLVPSSEDARISLAELLTKLGRHEEALEAVTQDSEASRIEASVLHHKCILLLKEG
RMNQFIAAYKLLMMRHARNIRSKDEIYKACGAKKIGWESADEESADDELEFGASSVELQE
EYRLLRLAAEHLFKEKRLVELERICFTALTSPLFRKKRDICREIQFITLQVCLAKGDSYY
AYNLARSLLLRCNNLYNNRVWNLLIQVIMRGDDVRYNRFLVRLLLKHPEHVCLSVLNGHA
CVASGTYKYALDEYMSACKMEPNNSLFLLLSAIVLVQLTCQKFSSGKHSLVTQASSFFDA
YLKSRGDCQEVFYNIGRGMHQLGLLTHALDFYKKALQFKPSVTQGKHAHVFDLSREIAFN
LSLIYRAADFSSSGFDVARMYLDKYITI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagggaagaccaagaacaccccattccgcaagtccaagtagtagcttcgtgt
gatagttcaggcgtaactctcatcaatgaagacacacctcttaacttagcagaaaatgga
ttgtatgaaatatcatatattaatattgcggaagaagatatggtgtctgagctagaattg
cttgacactgtgactaatgatgatgatagctcacgacaaagttttcctgagaattttgaa
gttgaagatgcagatgattcagatgatggagaaccaaatgcagatgaggaacaagttgct
atgacaaatgatttcttgtctggaaaaatttcatttcaggatttcataactagagtagaa
tgttcagatgattctcagtcaagtggagaagactattcagatatagatgatgaagaacaa
gtcctagaagaaaacaagagtgatccagaatatatccctgaaggcttatccaaacgtcaa
actaatctgcatcgaaaatctgaaggtcgaaaagaaatcattacagcacccaaagggaat
atagctgttgccagttacacaccacagccctcacctgcctccccactcaagaggaaaaaa
gctactactagagttatgaaaagacttccatcaaatttacttggtctgatgggtgaagca
aatttacggtacgccagaaatgagaagcaagatgccatcaacctctgcatggaggtcatt
cggcaggctcccaattatgctgaacctttccaagcgttaagcatgttctatgaagatctt
ggggattacgaaaagtcataccaattatctctaatagctgcatacttgtcccctcaagat
gctgatgaatggattcgccttgctgaggtgtgcttgagtcgtaacgatgaactgcaggcg
tcgaaatgtcttgccaaagctgtccaagcagatccttcaaacatacaaattcatcaaaat
cgctgtgaattgcttgaatccatgggcgcgcaaaaggatttgctgaaagcttgtctcacc
atgttacgatgtgtccaaccagaaaatgaacaaaaaagaaatgagtgggtcgagctggct
gttagaatagctcgcatgcatcatgcaagcgggcacctgcattccgcgcgtagagctctt
agcaatgccctagtcacctgttccgcgagtttcaccatggaacattataatcttttattg
gaactccaagttttgacgaagcattatctcgatgtgatgaaagtacttactaaacattgc
ggcttggtgtttaacaataaaatatttgatgcaattgacctcgaagaggcagaaacgatg
gaattgacacaggaattaccactggacattctcagcaagctttgtattgcactagtctac
tccaagaaacacgattttgcctttcccttaattgaaacgtttcttgaatatgatgtggaa
agttttggagatatttaccttgacgttgccgaggcccttgtggaaaacgaatttcaccaa
cgagctttgccattgttagaagcgctaacaaaaagccaatcgttttgtttggcggcagtt
tggttaaagtatgctaacagtctgtccgccctagatcgcgcggacgaagcgatcgtcgcg
ttccgtcatgtcattcatctagtaccatcaagtgaggatgcaaggatatctttggctgaa
ttgctcaccaaattaggacgccatgaagaggctttggaagctgtgactcaggattctgaa
gcttctcgaatagaggccagcgtgttgcatcacaagtgcatcttgcttcttaaagaaggg
cgaatgaatcaattcattgctgcctacaagttgttgatgatgcgtcatgccagaaacata
cgttcaaaagacgaaatctacaaagcatgtggtgccaagaaaatcggttgggaatcagca
gatgaagagtcggccgatgacgaattagaatttggagcctcatcggtcgagttgcaagaa
gaatatcgactcctgcgcttagcagctgaacacttgttcaaagaaaaacgcctggtggaa
ctcgaacgaatttgtttcacggctctgacgtctcctcttttcaggaagaagagagacatt
tgtcgagaaatccagttcataactcttcaagtatgcttagctaaaggcgactcttattac
gcttacaatctagcccgcagtttactgttgcggtgcaacaatttgtataacaacagagtt
tggaatctccttatccaggttatcatgcgaggagacgatgtgcgttacaatcgttttctt
gttcggttacttctcaaacaccccgagcacgtctgtttaagcgttttgaatggccacgcg
tgtgtagcgagcggtacttacaaatatgcactagatgagtacatgtcagcgtgcaaaatg
gagccgaacaattcattgttcttgttgctttctgctattgtgctagtgcagctgacgtgc
caaaaattttcgagtgggaaacactctctcgtcacccaggcttcctcattctttgatgct
tatctaaaatcaagaggcgactgtcaagaggtcttctacaacatcggtcgtggcatgcat
cagcttggtcttctgacccatgccttggatttttataagaaagctctgcagtttaaacca
agcgtcacacaagggaaacatgcgcacgtgttcgacttatcgagagaaattgcctttaat
ttatcgctcatatatcgagcagctgatttttccagttctggttttgatgttgctcgcatg
tacttggacaagtatatcactatttga
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