Daphnia magna (water flea): 116926510
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Entry
116926510 CDS
T07514
Name
(RefSeq) syntaxin-16
KO
K08489
syntaxin 16
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116926510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116926510
Membrane trafficking [BR:
dmk04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
116926510
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
DUF5345
T3SS_needle_E
DUF2207_C
RPA_interact_M
MCPsignal
Motif
Other DBs
NCBI-GeneID:
116926510
NCBI-ProteinID:
XP_032789329
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All DBs
Position
LG1:12048498..12050244
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AA seq
308 aa
AA seq
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MATRSITEIFILMRNNAIQSRNFYSEQISDTEALVQQELDARGKSHATHVRMPPDWTDSL
EEAQYTLTKIQTRLKELSALQNKHLLKPTFDDSMNEEHQIDVFTQDITKMFTTCHNCIKR
IQYNSTSPSLGQAETNIAKNVVTSLVTTLQNLSNTFRSDQNTYLNKIKSREERSQQFFGG
ASKDWNYDDWTTTSQTETPRVMSQQQLLLNEENSSFVEQREKEIQNVVRSIYELNSIFKE
ISHMVADQGTVLDRIDYNIEHTQAKVHDGLVHLQKADNYQKKNRKMVCIVALVSAIIVLI
IILIAVKS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacgaagtataacagaaattttcattctgatgcgtaacaatgctatccaaagt
cgcaatttttactcagaacaaatttcagatacagaagctttagtgcagcaggaactagat
gcacgggggaagagtcatgccactcatgtacgaatgcctccagattggacagatagccta
gaagaagctcagtacaccttgacaaaaattcaaacccgactaaaagaattgagtgctctt
caaaacaaacatcttcttaagccaacgtttgatgactcgatgaatgaagaacatcaaatt
gatgtcttcacccaagatataaccaaaatgttcaccacttgccataattgtataaaacgg
attcagtacaacagtactagccccagtcttgggcaagctgaaaccaatattgcaaaaaat
gttgtcacatctttagtcacaacgttacaaaatctttcaaacaccttccggagcgaccag
aatacatacctgaacaagataaagtcacgtgaggaacgctctcaacagttctttggagga
gcatctaaggattggaattacgacgattggaccaccactagccagactgagactccaagg
gttatgagccagcagcaattgctcttaaacgaagaaaactcgtctttcgttgaacagcgc
gaaaaggaaatccagaatgttgttcgctcgatatatgaactgaactctatattcaaagaa
atctctcacatggtggccgatcaggggactgtcctggataggatagactataacattgaa
cacacacaggcaaaagttcacgacggattggtccatttacagaaagccgataattaccaa
aagaaaaaccggaagatggtatgcatcgtcgctttggtttcagccattatcgttctaatc
attattttaattgctgttaaatcttga
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