KEGG   Daphnia magna (water flea): 116926588
Entry
116926588         CDS       T07514                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X2
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03020  RNA polymerase
dmk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116926588
  09124 Replication and repair
   03420 Nucleotide excision repair
    116926588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmk03021]
    116926588
   03400 DNA repair and recombination proteins [BR:dmk03400]
    116926588
Transcription machinery [BR:dmk03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116926588
  RNA polymerase III system
   RNA polymerase III
     116926588
  RNA polymerase I system
   RNA polymerase I
     116926588
DNA repair and recombination proteins [BR:dmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116926588
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 116926588
NCBI-ProteinID: XP_032789435
LinkDB
Position
LG7:11972621..11980995
AA seq 151 aa
MAGVLFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDINSWLFPMDLGDKFRLVL
ATTLREDGCSDAGEWAPQDLGIPSRADAFEYVMFGKVYRIEGDEGSTEPSSRLSAYASYG
GLLMRLQGDANNLHGFEVDQQIYLLIKKLAF
NT seq 456 nt   +upstreamnt  +downstreamnt
atggccggtgttttgtttgaagatattttcgatgttaaagacattgatcctgaaggaaaa
aagtttgacagagtgagtcggctccattgcgaaagtgaatcgtttaaaatggatttgatt
ctcgacatcaattcgtggctgtttccaatggatttaggggataaattccgtttggttttg
gcaacaactttacgcgaagacggatgttcagatgcgggcgaatgggccccgcaggatctc
ggcattccatcccgtgccgacgctttcgagtacgtcatgtttggcaaggtgtatcgtatt
gaaggcgacgaaggatcgacagaaccgtcttcacgattatcggcctacgcatcctacgga
ggtctgctaatgcggctgcaaggggatgccaacaatctccacggtttcgaagtggatcag
caaatttacctgttgattaagaaactcgcattttga

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