Daphnia magna (water flea): 116926672
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Entry
116926672 CDS
T07514
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116926672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116926672
03021 Transcription machinery [BR:
dmk03021
]
116926672
03036 Chromosome and associated proteins [BR:
dmk03036
]
116926672
Transcription factors [BR:
dmk03000
]
Eukaryotic type
Helix-turn-helix
ARID
116926672
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116926672
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116926672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
SpoIIP
Motif
Other DBs
NCBI-GeneID:
116926672
NCBI-ProteinID:
XP_032789493
LinkDB
All DBs
Position
LG7:complement(2094200..2111229)
Genome browser
AA seq
2367 aa
AA seq
DB search
MASTQAEVEPPRNGPEMKDLDGPTTNGVDAQREMETNSSNGPTSTPVSNNGSHDMNESSK
LQSSGGYYKPPVGYPVDSPSAGYENAQSGFGYPPHSYVHQQQQQGDLQQQGSYPYSQYPG
SNLVRNVSTPVLATKPVAYMNSMPRPGGGPVQSYPPVHHGGGAQGYPPSRYATPTLNQLL
QPGTGVPVQRYPYGDYPQQQPPPPNSHPASGWPMQQPQQPRNFAPGFKPPPNSMQQGGGY
PSYGPGAPIGHGIQQQRYALTPSGGPVQQPPPSQQEPVKGSGPGSGEPSAEANNTTAATT
SSIQRNSSSPSTSTLTVTTTSTSTAAVSSSSSSTPTTSSSTAVASPAVGRPPPAPSPASR
SMSPALGPPNSNNNSSHVSPSPGSQSDNNNSGPARMSHSPMAAQGAYQQPMPPPPHVGMP
SYKMGGSPYQQPQQQQQPMHHPQQQPSGQPQQPQYLPNPMYMQHPRPPLGPGGPSPYGPT
PGSYGPQHQQQPPPPAQQQQQPGAGMPPNSSNANQNPMPPASPGPNRSITPHMGPPTPYP
GYPPGGPNMSQYGQQQQQQQQQQQQQNWGPANAMPGGPPGSPMPVHGGKGAPPPSGPPTP
GPRPPGPSHTPPHYMKQHLQHHLQQQQQQKMYGMASSPSPAPSAPLQGPPQPPSLPQSQQ
PPTQQQQQHMGPYPPPPGMNNAGSMAGHPPSAASPVTNVVTTGPDGVAGLDEASQQSTLS
NTSAASGDDVSAPSTPRSRKETGSMPMTPSAHHPPFSQQQPLPPHQMLSHPPTPQSTVPS
PGPASLSSQHEEYNDVHSPGPGVGNWNVSTRPTPSSPVKKTSHMSDALARMYDFDDHPDR
RKFLDQLLRFMEEKGSPITACPTISKNPLDLFRLYLLVRDRGGFLEVTKNKAWKDIAQTL
GIGGSSSAAYTLRKHYTKSLFPWECKFDRGGVDPQPILNQVEATTKKKPAPKISVPSPAG
SSNSQDSFPSSGVPPIPSMDGYPNAHYPGYPPPHVGENIAASNPFDDQQHYGGRGGHPGY
PPHQQPPPSSAQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPSMYNTMAGRPGGYP
GHPGHANHPGNHPNQGGYHHPYQNEYPNPNNQQYPPFSTPPNRTMYSAPYPEPYNPQAPP
SGQAPPPGPGPGPGPSPSDPYGRFMPPNHVPGSATVSGPYPPRPPVPPAASVNVPTPTST
SSSNPATIATTTSTGPQLVPPSPLAQSMQPQQQPQPSQTQQPGSTSAGPSPAPSPAPNPG
TPGYPEQTDQYQRGGLRQLLASSTLLAPPPSDRQPVYPVGAAPSSLGPPPGQPYPGIIRP
GTPGPAPVGMPPRQSTPAPTGMNPPVGSATGAAVGPNPNAPSAPGAPNQQQPQSGPYPPY
GPPGPAPNQQPRQPSFDSYGAYRSPYGTAGSSDQTASGGAGGIMGFCSNLSTGWRNSTPF
VNQYPQQGNSPGPVQTVGAPWVPPTGTPQPRNPAWDQAQRYPGPIPATPATTINGTSHQQ
GPPTAVAVPPHNSMAQQQQQQQQQQPAQQQTPPQQPQPWTGPQTMANNRQPFMGPRPPYT
SLRAPDGKPYPMPPISGKGPMTGPPGPVNFPQGMPPGPTVNMPIYSAKRESYFPPDSVEA
VVPVMAKRRRLCRADVVPVDAWRVYLALKSGLLAESTWAIDILNVLLCDDSSVHYFSLAY
MPGLTEVLLEHFRRCLSQIFTILEDMEIGFDRVEEFKNKLKQRCIKPAADSCQATSGTAV
DEDEDAWWNWPKRKAQPDGMDVTDLGAVKNCDLSGDSVRLLDGPDWSMNTRRGEKVGVVP
RDKELFVVDVKKEWDVHDGFESGMDQWQIGGGDTTQHIVTHFTAELNIVPFVRVLKKVDK
RAAEQQGDTVEPINERTERQLEPNGVKEKRSEEPSHPTSNSSVQAKNCLVKPSRNLADVL
KRIKKEDVSSSAPDQEKAAQQPNAEEAARLVAGPSASRLEEAEVKKEPIESVEGRQEAAA
KAPVRPAESSSTVMTLPSGNRLIIRDPHGTLKRRKTDDQEDECYTRDESSLYLIDDSQDA
LSRRALALSNIFRSLSFVPSNESELAKNSTLLVIVGKILLLHHDHPLRSSHQKNYDREED
VDFASVDSLADRGSASGLSKCETDWWWDTLLALRENILVIMSNIAGQLDLSIYSEEIVRP
VIDGLLHWAICPSAQSQDPFSSFGPNSTSLLSPQRLSLEALCKLMVMDCNMDLILATPPF
SRLEKLVHFLTRSLCRTEDQVLREFAVNLLYYLSAADSGMARLIALHNNSLALLVSFVEQ
AEANALAVASQHGIQALRENPESMGTSLDMLRRAASTVFHIARHPESRPLLAKLEQRLLA
LVMSQIMDQSVAALLSKSLYLCNSDDE
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacccaagctgaagtggaacctcccagaaatgggccagaaatgaaagatttg
gatggccccaccaccaacggggtggatgctcagagagagatggagacaaatagctccaac
gggccaacttctacccctgttagcaacaatggctctcacgacatgaacgaaagtagcaag
ttgcaatcaagtgggggttactacaagcctcctgttggatatcctgtagattccccttct
gctggctatgaaaatgcccaatctggatttggataccctcctcacagctatgttcatcag
caacagcagcagggtgatttgcaacagcagggcagctacccgtactctcagtatccaggc
agcaacctggttcgcaatgtgtcaactcctgtccttgccaccaaaccagtggcgtatatg
aattctatgcccaggcctggtggtggacctgtgcagagttatcccccagttcatcatggt
ggtggtgcacagggttatcctccctctagatatgcaacaccaacattaaaccaacttctt
cagcctggaacaggagtgccagtgcaaagatatccttatggagattatcctcaacaacag
ccaccaccaccaaattcacatccagcttctggctggcctatgcagcagcctcaacagcct
aggaattttgctcctggattcaagcctccaccaaactcgatgcagcagggaggaggatat
ccctcatacggacctggtgcccccataggacatggaatccaacagcaacgatacgccctc
acgcctagtggaggaccagtacagcagccgccaccatcgcagcaggaacccgtcaagggc
agtggcccaggatctggagagccatctgccgaagcgaataacaccacggccgctacgacg
tccagcatccaacggaatagcagcagcccgtcgacgtcgactttaactgtaacgacaact
tccacgtcaacagccgccgtcagtagtagtagcagcagcacgccaacgacgagctcgtca
acggccgtcgcttcgccggctgtcggaaggcctcctcctgcgccatcgccagctagtcgg
tccatgtcaccggctcttggaccaccgaacagtaataataacagcagccacgtttcgccc
agtccggggagccaatcggacaataataatagcggaccggcgcgtatgagtcattccccc
atggcagcccaaggagcgtatcagcagccgatgccacctccgccacatgttggtatgccg
tcatacaaaatgggtggctctccgtaccagcagccgcaacaacagcaacagccgatgcat
catccacagcagcagccaagcggccagccgcaacaaccacagtacctgcccaatccaatg
tacatgcaacatccgaggccacctttgggaccgggaggcccaagtccttatggtcctact
cccggatcttatggtccacagcatcagcagcagcccccgccgccagcacagcagcagcag
cagccaggcgccggaatgccacctaatagcagtaatgccaaccaaaatccgatgccacct
gctagccctggtccaaaccgatcgattaccccacacatggggcctccgacaccttaccca
gggtatccaccaggtggtcccaacatgagccaatacggccaacaacagcagcaacaacaa
cagcagcagcagcagcaaaactggggtccagccaatgcgatgcctggaggaccgccgggc
agtccaatgccggtgcatggaggcaaaggcgctcctccaccttctggtccgcccactcct
gggccgcgacctcctggcccgtctcacactccgcctcattacatgaagcaacacttgcaa
caccacttgcaacaacaacagcaacagaaaatgtacggcatggcttcgtcgcccagccca
gctccttctgcgccacttcaagggccgccgcaaccgccttctcttccgcaatcgcaacaa
ccgccaacacaacaacagcagcagcatatggggccttatcctccaccacctggcatgaac
aatgccggcagcatggctggtcatcctccgtcggcagcttctcctgttaccaatgtggtg
acgacaggaccggacggtgtggcaggactggacgaagcctctcagcagtcaacgctgtct
aacacgtcggcagcttctggtgacgacgtttcggctccttcaactccacgttcgcgcaaa
gaaaccggctcaatgccaatgaccccgtccgcccatcatccgcccttttctcagcagcag
ccgctgccgccgcaccaaatgctcagtcatccaccaactccgcagagcactgtgcccagc
ccgggtccagcctccttatcttcgcaacacgaagaatacaatgacgtacacagtccgggc
ccaggtgtaggcaattggaatgtctcgacacggcctacaccatcctccccggtaaaaaaa
acctcacacatgagcgacgcacttgcgcggatgtacgattttgatgaccatccggatcga
aggaagttcctcgatcagttgttgcgtttcatggaagagaaaggcagccccatcacggcc
tgccctaccatatcgaagaatccattggacctcttccgtttgtacctgctggttcgggac
cgaggaggtttccttgaagtgacaaagaacaaagcgtggaaagacattgctcagacgctt
ggtatcggtggttcgtccagtgccgcctatacgttacgtaaacactacaccaaaagcctc
ttcccatgggagtgcaaatttgatcggggcggcgtcgatcctcagcctatactcaatcag
gtggaggctacaactaagaagaaacctgcacctaagataagcgtgccctcaccggctgga
tcgtccaacagtcaggattcgtttccgtcttcgggagtgcctcctatcccttcaatggat
ggctacccaaatgcacactatcccggctaccctccaccgcatgttggagaaaacattgct
gctagcaatccgtttgacgatcaacagcattatggcggccgaggtggacatcccggctat
ccgccacatcaacaacctcctccttcatctgctcagcagcaacaccaacagcagcaacaa
cagcagcagcagcagcaacagcaacagcagcaacagcaacagcagcaacaacaacagcag
cagcagcaacagcctccttcaatgtacaatacaatggctggacgacctggaggctatcct
ggccatccaggtcatgctaatcatcctggcaatcacccaaaccagggaggctatcaccat
ccgtaccagaacgagtacccaaatccgaataaccagcagtatcctcccttctcgacccca
ccaaatcgaacaatgtattcagctccctatccggaaccttataaccctcaagcaccgcca
agtggacaagctccacctcccgggccgggtccaggtcctgggccatcaccttcggatcct
tacggccgtttcatgcctcccaatcacgtcccaggaagtgcgacagtatcggggccttac
cctccacggccgcctgtacctcctgcggcatcggtcaacgttccgacaccgacatcaacg
tcaagttccaatccggcgacgatagccaccacgacttccacggggccacagttggtgcca
ccgtcacccctcgcacaatctatgcagccacaacaacagccgcagccttcgcaaactcaa
caacccggcagtacaagtgccggtcccagtccagctcccagtccggcgccaaatccggga
actcctggttatcccgaacaaactgatcagtaccagcggggtggacttcgccaattgttg
gcctcatcgaccttgttggctccgcctccttctgatagacagcctgtttatccggtggga
gctgcaccatccagtttgggcccacctcccggtcagccttatccaggaatcattcgaccg
ggaactcctggtcctgccccggttggtatgccaccacgacaatccactcctgcaccgacc
ggtatgaacccaccagtcggtagtgcaacgggtgcagcagttggacccaatcccaatgct
ccttccgcccctggcgcaccaaaccagcagcagccgcagtcgggaccgtatccaccttac
ggtcctcctggtccggctcccaatcaacaaccacgacaaccttcgttcgattcttacgga
gcttaccggtcaccttatggtacggctggttccagcgatcaaacggcgagtggtggagcg
ggtggaatcatgggtttttgtagcaatctttcaacaggttggaggaatagtacgcccttc
gtgaaccaatatccacagcagggtaatagtcctggtcccgttcagacagtaggagctcct
tgggttccgccaactggaacgccgcaaccacggaacccggcgtgggatcaagctcaaaga
tatcctggtcctattccggctactccggctaccacaatcaatggaacgagccatcagcaa
ggacctccgacggcagttgccgttcccccacacaactcgatggctcaacagcagcagcag
cagcagcaacaacaaccggcgcagcagcaaactccgccgcaacagccgcaaccgtggact
ggaccgcaaacgatggccaacaatagacagccattcatgggacctcggccgccctacaca
tcgttacgcgctccagacgggaaaccttaccctatgccaccgatttccggcaagggacca
atgacgggtccgcccggacccgtcaactttccacagggcatgccacctggaccaacggtt
aacatgccaatctactcggcgaaacgcgaatcgtatttccctccagattcggtcgaagct
gttgtgcctgttatggccaagcgccgtcgcctttgtcgcgctgatgtagttccagtcgat
gcctggagagtctatctggcgctcaaatcgggtctattggccgaatcaacgtgggccatc
gacatcttgaacgtgttgctgtgcgacgattccagcgtgcattatttcagtctggcctac
atgcccggtctgacggaagttctgctggaacacttccgccgttgcctgtcgcagatattc
accatcttggaagacatggagatcgggttcgaccgtgtggaagagttcaaaaacaaattg
aagcaaagatgtatcaaaccggcggccgacagttgccaagcgacaagcgggacggccgtg
gacgaggacgaagatgcttggtggaactggcccaaacggaaagcgcagcccgacgggatg
gatgtcacagatttaggggctgtcaagaactgtgatttgtccggggacagcgtccgtttg
ctcgacggacccgactggtccatgaacactcgtcgaggcgaaaaagttggcgtcgtccct
agagacaaggaactctttgttgtcgatgtcaagaaagagtgggacgttcacgatggcttt
gaaagtggcatggaccaatggcaaatcggcggcggtgacaccacccaacacattgtcacg
cactttacggccgaactaaacattgtcccttttgttcgggtgctgaagaaagtggacaag
agagcggcagagcagcagggtgacactgtggaaccaatcaacgaacgaacggaacgccag
ctggaaccgaacggggtgaaagagaagcgatccgaagagccatcccacccaacgtcgaac
tcgtccgttcaggcgaaaaactgtctcgtaaagcccagtcgcaatttggctgacgtcctc
aaacggatcaaaaaagaagacgtgtcttcttccgccccggatcaagaaaaagctgcccaa
cagccaaacgccgaagaggcagccagacttgttgccggtccatctgcaagcagactggaa
gaagcggaggtgaagaaggaacccatcgaatcggttgaagggaggcaggaagcggccgcg
aaagcgccagtccggccagcagagtcttcgtcgacagtgatgactcttcctagtgggaac
cgtttgattatccgggacccgcacgggacgttgaagcgacgcaagacggacgaccaagag
gacgagtgttacacgcgcgatgagagtagcctctatttgatagacgacagtcaagacgct
ctgtcccggcgtgcgctggccctatccaatatcttccgcagtctgagctttgtgccaagt
aacgaatcagagctggccaaaaattccactttgctggtcattgttggcaaaatccttttg
cttcatcacgaccatccgctgcgatcgtcgcaccaaaagaattacgaccgagaagaggat
gtcgactttgcctctgtcgactcgctagccgacagaggatcggcttcgggtttgagcaag
tgcgaaacggactggtggtgggacacgttgctggccctgcgcgagaacatcctcgttata
atgtcaaacattgccggtcagctggatctgtccatttattccgaagagattgttcggccg
gtgattgacggcctcctccattgggccatctgtccgtctgcccagtcacaggatcctttc
agttcattcggtcccaactcgacgtcgctgctgtccccccagcggctcagtctggaggcc
ttgtgcaaattgatggtcatggactgcaacatggacttgatcctggccacgccaccgttt
tcgcgactggaaaaactggtccacttcctgacgcggtcgctctgccgcactgaggaccag
gtccttcgcgagtttgccgtcaacttgctttactacttatcggccgccgattccggcatg
gcccggctgatcgccctgcacaacaacagtctggccctgctggtgtcgtttgtcgaacag
gccgaagccaatgcgctggccgtggccagccaacatggcatccaagcgcttcgcgagaat
cccgagtcgatgggcacgagcctggacatgctgcgacgagcggcatcgaccgtgttccac
atcgcccggcaccccgagtctcgcccgttgctggccaaactcgagcaacggcttttggct
ctagtgatgtcgcaaatcatggaccagagtgtggccgccctcctctccaaaagtctctac
ctctgcaacagtgatgacgaatga
DBGET
integrated database retrieval system
