Daphnia magna (water flea): 116926755
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Entry
116926755 CDS
T07514
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116926755
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116926755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
116926755
NCBI-ProteinID:
XP_045031987
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All DBs
Position
LG7:complement(1143194..1148602)
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AA seq
1008 aa
AA seq
DB search
MASNNPYFNNFIPAGNQQAAGTQAYGASAGPSPGYSAGGHSAPAAGQTSYDTAYPNTAAF
AAGYYGFPGKPNYEPSKNYFPGPPGPGKQDGPGLPPTHYQGYEAAFFNAAHAYLHHQPGP
KPPQMGGGGGGGQMSGNKSGHGGGQGGPKTRGRYFAGGFNQRWTSSTTQQLHYCEVCKIS
CASPQTYKDHLDGQKHKKKEAAVRTGLPMVPTPRTGAALHCELCNVTCTSSDAYAAHIRG
TKHQKVVKLHTKLGKPIPPAEPQLIHSKTGGSTGTAPATPVTTTTIATTATTVSAVTTTP
AVTTTSAATAATPTPTVPAPTSTTAVVKVVAATPKINFLGGNYLNTHVGSKSNGSESEAA
LVTTTTAQASQIIKKEEVPMTAAVATETAQAVVAQWEEEKVIQPVGQDYVEELRGGDGKI
TGFNCRLCDCRFNDVNAKDMHLKGRRHRIMYKKKVDPNLVVEAKGWPALRQKNKTMPGWQ
ERRKPNEGGWEGNENYEEMPQAPSSMEDGNQPRPPAYWASPSRGGLRHGGISMGLPPPPQ
YFPTGSLPMGLPNPAMRKPESSDDRHVMAKHSEIYPSEAELEAIQTLVSYVERSLKLVSD
QLTHQPEDKTKVSETQSSNDLAQSPVPAVAAPAASQADVPVPVPPVAPATTPTATPAPAL
VPAAAATNGPAQPQRMLKGVMRVGLLAKGLLLKGDRTVQLVVLCSQPPTYQLLDRVAQAL
PAHLSVVAPSITFNVETLPNEAVVMVKSVQGHGLAGDILVKVSLTSPVVREEQLAAAAAA
ATVATNGTTSTGNDVDMKDAAAIKEGRLNTKDCLHSLALLRRAKWFQARANTLQNCVLVI
RVMRDFCMRSPVWSNLELWAIELIVERAAFSAGTPLSAGDALRRVFETISAGILLSTNDG
WGPGIGDPCEKDAVDVCSNLTAQEREDMTSSAQQALRQIAFRQIFKVLGMSKPLSSGSRS
FNKASPAAAGPSPGKKRPRENSTSDTISPEAGEVPTDLKKEKIEGQDA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaacaacccgtactttaacaacttcatcccggctggaaatcaacaagcagct
gggacgcaagcgtacggagcttcggccggaccaagcccgggctattccgccggtggccac
tcggccccggctgcgggccaaacctcctacgacacggcctatcctaacacggcggctttt
gctgcaggctattatggtttccctggcaaaccaaactatgaaccatcaaaaaactatttc
ccaggaccaccaggaccaggtaagcaggatggaccaggactacctccaactcattatcaa
gggtatgaagcagctttcttcaatgcagcgcatgcttacttgcatcatcagcctggacct
aagccaccccaaatgggtggagggggtggaggaggccaaatgtccggaaacaaatctggt
cacggtggcggacaaggtgggccgaaaacccgtggtcgttacttcgccggtggtttcaat
cagcgttggaccagcagtacgactcaacaactccattactgtgaagtttgcaaaatttcc
tgtgcaagtcctcagacttacaaagaccatttggatggtcaaaagcacaagaaaaaggag
gcagccgtccgtactggcctccctatggttcccacccctaggactggagctgccttgcac
tgtgaactttgcaatgtgacgtgcacttcttcagatgcctatgcagcgcacattcgtgga
acaaaacatcaaaaggtcgttaaattacacacgaaactaggcaaaccaatccctccagca
gaaccacagttgattcattcgaaaacgggtggctcaactggaaccgcaccggctacacca
gttactacaactactatagccactacagccacaacggtcagcgcggtgaccactacgcct
gctgttaccactacatccgccgcaacggccgctacccctacacctacggtacctgcacct
acatctacaacagcagtcgtcaaagtagtggctgcaacgcctaaaatcaattttctgggt
ggaaactatttaaatactcatgttggatcaaaatctaacggatctgaaagtgaggctgcg
ctcgttacgacaacgacagcgcaagctagccagataatcaaaaaagaggaagtcccaatg
acagctgctgttgctactgaaacggcacaagcagtggttgcacagtgggaggaggaaaag
gtgattcaacccgttggccaagattacgttgaagaattacgtggcggtgatggcaaaatt
accggctttaattgtcggctctgcgattgccgcttcaacgatgtcaatgccaaagatatg
catctgaaaggcagacgtcataggataatgtacaagaagaaagtagatccaaatttggtg
gtagaagccaaaggttggccggccctccgtcagaaaaataagaccatgcccggctggcaa
gaaagacggaaacctaatgaaggtggctgggaaggtaatgaaaattacgaagaaatgcca
caagctccttcgtcaatggaagatggaaaccagccacgtcctccagcctattgggctagc
ccatcccgaggcggacttcgacatggtgggatctcaatgggtctaccaccaccaccacag
tatttccctaccggctccttgccgatggggcttcctaatccagctatgcgtaaacccgaa
tccagtgacgatcgccacgtcatggcgaaacattcagagatctacccatcggaagccgaa
ttagaagccatacagacgctcgtctcgtatgttgaacgctcattaaagttagtttctgat
cagctaacgcatcaacctgaagacaaaacgaaagtttcggagacgcaatcatccaatgac
cttgctcaatcgcctgttccagccgttgctgcgcccgccgcttctcaggctgatgtgccg
gtccctgttcctcctgtcgctccagctaccacccctactgcgacccccgccccagcgctt
gttccagctgcagcagccacgaacggcccagcccagccacagcggatgttgaaaggcgtc
atgcgagtggggttgcttgccaaaggattacttttaaaaggcgaccgaactgttcagttg
gtcgtcctctgctctcagccacctacttatcagttgctcgatagagttgctcaagctctt
ccagcccacctctctgttgtcgcaccatcaatcacgttcaacgtcgaaacgcttccaaat
gaagcagttgtcatggtaaaatcggtccagggtcatggcctggcgggtgatattttggtc
aaggtctcgctgacgtcccccgttgtcagggaagagcaactagccgccgccgctgctgct
gctaccgttgctaccaacggaacgacttctactggcaacgacgttgacatgaaagatgcc
gctgctatcaaggaaggtcgtctgaacaccaaagattgtttgcattcgcttgcgctccta
cgccgagccaaatggttccaagctagagccaatactcttcaaaattgcgtcctagtaatc
agggtcatgagggatttctgtatgcgttcgcctgtctggtcgaatctggaactctgggca
atcgaattgattgtggaaagggcggctttcagcgccggcacaccgctctctgcaggcgat
gccctgcgccgggtatttgaaacaatttctgccggcattctattaagcaccaatgacggt
tggggtcctggtatcggagatccgtgcgaaaaggacgctgttgacgtttgtagtaattta
actgcacaggaacgtgaagatatgacatcgtccgcccagcaagcgttgcgtcaaatcgcc
ttccgccaaattttcaaagtgctgggcatgtccaaacctttgtcatcaggatcgcgcagc
ttcaataaagcttcaccggccgccgcaggaccttcacctggcaaaaagcgtccccgtgaa
aactcaacgagcgacactatcagccctgaagcaggcgaagttccaacagatctgaagaag
gagaagattgaaggccaagatgcttaa
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