Daphnia magna (water flea): 116927053
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Entry
116927053 CDS
T07514
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116927053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116927053
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116927053
SSDB
Ortholog
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GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
116927053
NCBI-ProteinID:
XP_032789909
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All DBs
Position
LG7:795708..798846
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AA seq
681 aa
AA seq
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MHNSETDGGSFLLYEQDGVLLTTKGISGDSSNLHLGKLRIVKEKTGIYMLWLSEENIGGP
PFSGSAETDWTVINPNQGSVGYHNNGTGRPIRFEVEDLKCICLSPISDSNGQPRRHNSGA
KADPARTCNVTFVQTDGTTYSNLIFPGGSTSGLLDALTQHLVLKRSCHDDSMILCEPKSP
KTRRDPYERSLAELRLFPDRNPAAMHSASYARLGQLGQFGVGAWRFVNDLKRDPYTATMT
AFSKISDYLLHEEEKANEDIAELLQKSLSLDEPTTAVQRVPIANCDADENTVLVGSSDSS
VEGYEVIQPPVADLFPRPKVLRGQPLSEVEWQTYFDDEGMIQNSEEIRRKIFSGGIEPSI
RSEVWKFLLGYYPWHTSQVERKELRDTKVEEYFRMKLQWRSMSADQESRFAAFKQRKDLI
EKDVNRTDRTIPYYAGENNANVSTLRDVLMTYMMYDFDLGYVQGMSDLLAPLLYVLDDEV
DAFWCFVAYMERVSLNFQLDQAGIKRQLSQLRVLLQAVDPHLASYLDTRDSGNLFFCFRW
LLVLFKREFNYPQILRLWEVFWTDGPFHGDSASYSSSNFHLLLALSILDSQRNTILENRF
GFTEILKHVNDLALYIDLEEALAKAEGIFIQIKDSPSVGMEVRSVLGLRETSDSSDDSPS
SNSTDYLSEERYENALGLHYL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcataattcagagactgatggaggatcgttcctcctgtacgaacaagacggagttcta
ttgactacgaaaggaattagtggagacagttctaatcttcatctggggaagttacgcatc
gttaaagagaaaacaggaatatacatgctatggttaagcgaggaaaacattggaggtcca
ccattttctggatctgcagaaactgattggacagttattaaccctaatcaaggctctgtg
ggttaccataacaatggtacagggagacctattcgttttgaagttgaggatctgaagtgc
atctgtttatcgccaatttccgatagcaatggccaacctagaagacacaacagtggggct
aaagcagaccctgcaaggacctgtaatgtaacatttgtgcaaactgatggaacaacatat
tctaaccttattttccctggtggatcaacatctggtctacttgatgctcttacacagcat
ttagtgttgaaacgatcttgccatgatgactcgatgattttgtgtgaacccaaatccccc
aaaacaagaagagatccctatgagcgatcactagctgagctccgccttttcccggacaga
aacccagccgctatgcattcagccagctatgctagattaggccagttgggtcaatttggt
gttggagcctggagatttgtaaatgatctgaagagagatccttacactgcaacaatgaca
gctttttcaaaaatatcagattatttgctgcatgaagaggaaaaggcaaacgaagacatt
gcagaattacttcagaagagtttgtcattggatgaacccacaacggctgttcaacgcgtt
cctattgccaactgcgacgcggatgaaaacacggtgcttgtgggtagctctgattcttct
gttgaagggtatgaagtaattcaacctccagtggcagatctctttccgagaccgaaagtt
cttcgagggcaacccttaagcgaagtcgagtggcaaacctatttcgatgatgaagggatg
atccagaattcagaggagattcgccgcaaaatattttcagggggaatagagccgtcaatc
agaagcgaagtctggaaattccttttaggctactacccctggcacacaagccaggtcgag
aggaaagagctacgtgacacaaaagtggaagaatatttccgcatgaagcttcaatggcgt
tcaatgtctgccgatcaagaatcgcgttttgccgctttcaagcaacgaaaagacttaatc
gaaaaagatgtcaatcgaacagatcggacaattccctattatgctggggagaataatgcc
aatgtatccacccttcgtgatgttctcatgacgtacatgatgtacgatttcgacctcgga
tatgttcagggcatgagcgatttgttagccccgcttctctacgtcctagacgacgaagta
gatgccttttggtgttttgtggcatacatggagcgcgtaagtttaaacttccagctagac
caggctggcattaagcggcaattaagtcagcttcgagtgcttttgcaagctgttgatcct
catttggcttcctatcttgatacgcgcgactctggcaacctgtttttctgctttcgctgg
ctcttagtactcttcaagcgcgagtttaactatccgcaaatcttgcgcttatgggaagtc
ttttggacggatggaccattccatggcgactcagcttcatattcatcatccaattttcac
ctattactggcccttagtattttggacagtcagaggaacactatcctggaaaaccgtttt
ggatttactgaaatacttaagcatgtaaacgatctggcgttgtacattgacctggaagaa
gcgctagcaaaagctgaaggaattttcatacaaattaaagactctccttcagttggtatg
gaagtccgtagcgtcctcggacttagagaaacgagcgactcatctgatgacagtccatca
tcgaatagtacggattatctatctgaggagcgctacgaaaatgcactcggccttcattat
ctgtaa
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