Daphnia magna (water flea): 116927345
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Entry
116927345 CDS
T07514
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116927345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116927345
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dmk04147
]
116927345
Membrane trafficking [BR:
dmk04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
116927345
Exosome [BR:
dmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116927345
Exosomal proteins of colorectal cancer cells
116927345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
Motif
Other DBs
NCBI-GeneID:
116927345
NCBI-ProteinID:
XP_032790249
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Position
LG7:complement(3044033..3046434)
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AA seq
385 aa
AA seq
DB search
MDRLYFKDKNDCSKEITSYSHTTWKGIRLYDGDSKTEYRSETAYLTPSRLYFSSNDRPAM
NMVLDLKCVVLVEEEEGSILRSSKIILHLLPHVSEQHSKPYTRSSASFIKLAFSNGGLSN
FKICIQKPLLERAWEKHTESSSTSHSAPMAFRSGIVGIERRLQEKVENNSSSIQVAFQDM
KNLIDMAKDMVQLASVMSSKIKDRHGDISDDETVKFKSYLLSLGIEDPVTRNACSSSNMF
CQHLAKEITTFLLTPISDSGGFMSLSDAYCRVNRARGFELLSPEDFFQACNYMEQLNLPL
TCRKFESGVLVLQLQSETNSQLEKDTESLLQARRKLTAFEVSQELGITIILAAECLYTME
RKGVLCRDDTVRGLVFYHNEFSSRT
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggatagattgtattttaaagacaaaaatgattgttctaaagaaattacttcttattcc
cataccacatggaaaggaatcaggctatatgatggggattccaagactgaatatagaagt
gaaactgcctatcttactccatcacgtttgtacttctcgtctaacgatagacccgcaatg
aatatggtactagatttgaaatgtgttgttcttgtagaagaagaagaaggcagtatatta
agaagtagtaaaattatacttcatcttctcccacacgtcagtgaacaacattccaagccc
tatacaagaagctcagcatcatttattaaactagcattttcaaatggtggactaagcaat
tttaaaatctgcatccagaaacctcttctagaaagagcttgggaaaaacacactgagagc
tcttctacatctcattcagctccaatggcgttcaggtcaggaattgttggcattgaaaga
cgtctgcaagaaaaggtcgaaaataattcgtccagtatacaggttgcatttcaagacatg
aaaaacctcattgacatggctaaagatatggttcaactagcaagtgtgatgtcgagcaaa
atcaaagatcgccacggagacatcagtgacgacgaaacagtaaaatttaaatcatacttg
ttgagtcttggaattgaagatccagtcacaagaaatgcctgctcttccagcaatatgttt
tgccaacatctagccaaagaaataacaacatttttattaacgccaatctcggattctggt
ggctttatgtctttaagcgacgcatattgtcgtgtaaatcgagcacgtggatttgaattg
ttgtcaccggaagatttttttcaggcgtgtaattatatggaacaattaaacttgcctcta
acttgccgtaagtttgaaagcggtgtgttagtacttcagctacaatccgaaacaaattcg
caacttgagaaagatacagagtccctgttacaggctaggcgaaagttgacagcgttcgag
gtatcacaagaattggggataactattatattagctgctgaatgtctttacactatggaa
aggaaaggagtattgtgcagagatgatacagttcgcggcctcgtgttctaccataatgaa
ttttctagtcgcacgtaa
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