Daphnia magna (water flea): 116927434
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Entry
116927434 CDS
T07514
Name
(RefSeq) rab11 family-interacting protein 4 isoform X2
KO
K12485
Rab11 family-interacting protein 3/4
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116927434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116927434
Membrane trafficking [BR:
dmk04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116927434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
RBD-FIP
EF-hand_6
EF-hand_9
EF-hand_1
Shugoshin_N
DivIC
ZapB
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116927434
NCBI-ProteinID:
XP_032790351
LinkDB
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Position
LG7:complement(10030727..10043993)
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AA seq
617 aa
AA seq
DB search
MEAQLCDRQHQLNNHKNSDVDMVHQQLLRRVFQMCDVQRRGHISIDDLLELGQSYLGQHT
KDLADALRSLDPLGDGTLTFDEFCRGVGSIIQQSPTEGATSRDLTSFTSSSSPTKRSRTL
IDWSELTMPLATDAGDHSTAAEAAHLIVNDEDILLTSVDGSVAGKRRNSSSDEVDSGYSK
SSSPTDSAPTAGSVSGCSSMSEREISFEGYGEADHSIENGTPSDADANPVPQLIGNRANW
MNGMLRNSLRRSDYNSHGDGAFGRRYGSLRLPSKRGVGLAAGSNALASQLYSKNVNNASS
RNSNGGDNEDFCSDASLEDDVVDLGHKVQILQQQITALADTQFSSDDRYSRSKQENAALT
ARLQMLEESLRDVELRATQQLSEEQRRNKELIVRVEREKQLEIENCTIKLQAAEREVELT
REECARLRGQTERLRGERSALQQRLYEAETSLLEGQEELRRMSDLVKREREQWAVESASG
KQLAAELSREVDLLRATQQHNQHYNDSGEVTPSAARVREMENEIKALKQQNSSLREANDE
LQAQLFSRGLEEGRTLLSEHLTCNSLAAEFEVMSQDDIRTALREQQDVNAQLRSYIEGIL
LTIVENQPSLLERKPPQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcagctgtgcgaccgccagcatcagctcaataatcacaagaacagcgacgtc
gatatggttcatcaacaattacttaggcgcgtctttcaaatgtgcgacgttcaacgcaga
ggtcacatctccattgatgatctactcgaactcggacagtcctatctcggacagcatact
aaggacttggcggatgctctgcgctccctagatccgcttggtgatgggacgctgacattt
gatgaattctgcagaggcgtcggatccatcatccagcaatcacctacagaaggcgcaacc
tcacgagacctgacatcatttacctcctcctcatctccaacgaaacggagccggacgctg
atcgattggagcgaattgaccatgccattggcgacggacgcaggcgaccattccacagcg
gcagaagcggctcatctgattgtgaacgacgaagacatcctgctgacctcggtcgacgga
agtgtggccggcaagcgacgcaattcttcatccgacgaagtggattccggttacagcaaa
agcagcagtccgaccgattctgcgccgacggcgggaagcgtcagtggctgttccagcatg
tcggagagagaaatcagcttcgaaggctatggggaggcggatcattccattgagaacggg
acgcctagcgacgcagatgccaatccagtacctcagttgattggcaatcgagccaactgg
atgaatggaatgctgcgcaatagtttgcggcgatccgattacaacagtcatggcgatggc
gctttcggtcgacgctacggatctctacgccttcccagtaaacgaggtgttggtctagca
gccggttccaacgccctggcaagtcaattgtacagcaagaacgtcaacaacgcgtccagc
cgcaactcgaacggcggagacaacgaagacttttgttcggatgcttcgcttgaagacgac
gtcgtcgatcttggccataaggttcaaattctgcagcaacaaattacagccctggcagac
acgcagttcagcagcgatgaccggtacagccgcagcaagcaggagaacgccgcccttacc
gctaggttgcagatgctggaagagagcctgcgcgacgtggaactacgagccacccagcag
ctaagcgaagaacagcgacggaacaaggagctgattgtgagagttgagcgtgagaaacag
ctagaaatcgagaactgcaccatcaaattgcaagcggccgaaagagaagtggagctgact
cgggaagagtgcgccaggctgcgcgggcagacggaacggctccgtggtgagcgttcggct
ctacagcagaggctttacgaagcggaaacgagccttctggagggtcaggaagaacttcga
cgaatgagcgatcttgtgaaacgcgagcgcgagcaatgggccgttgagagcgcctctggt
aagcaactggcggccgagctctcgcgtgaggtcgacttgcttcgcgctactcaacaacac
aaccagcactacaacgacagtggcgaagtgacgcccagcgccgcccgtgtccgcgaaatg
gagaacgaaatcaaagcgcttaaacagcagaacagcagtcttcgcgaagcgaacgacgaa
cttcaggcccaactcttctcgcgcggcctcgaagaaggccgcacgttgctgagtgaacat
ttaacttgcaacagcctggccgctgaattcgaagtcatgagccaagatgatatacggacg
gctttgcgcgagcagcaggatgttaacgcccagctgcgctcttacatcgaaggcatcctg
ttgacgatcgtcgaaaatcagccgtctctcctcgaacggaaacccccgcagtga
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