Daphnia magna (water flea): 116927543
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Entry
116927543 CDS
T07514
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00450
Selenocompound metabolism
dmk00970
Aminoacyl-tRNA biosynthesis
dmk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116927543
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116927543
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmk01007
]
116927543
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116927543
Enzymes [BR:
dmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116927543
Amino acid related enzymes [BR:
dmk01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116927543
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116927543
Prokaryotic type
Other AARSs
116927543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_C
GST_C_3
GST_C_2
Anticodon_1
GST_N_5
GST_C_7
Motif
Other DBs
NCBI-GeneID:
116927543
NCBI-ProteinID:
XP_032790471
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All DBs
Position
LG1:complement(2742560..2750695)
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AA seq
935 aa
AA seq
DB search
MKLITRPNDFSGLKILLASEFLNLPIELEVTPSAEKTVLIVNDDCQLFSCNAAVWYLACL
SGQNKVNLQQDKWMDWESTTLHPEIQAFLNKQPQQLIPTLEHLDKATRNKFLIGNSLSAA
DIVIFCSLIVISDCKFMANCPNVTKWFNNMYTSAQFKIAASKLDIKIKQTEPDQCEEEEA
AISLEDIEHAVKHWKTSNINKPKPITHPVLPVEGERNVLITSALPYVNNFPHLGNIIGCV
LSADVFARYCRLRNYNTLYICGTDEYGTATETKALEEGLTPQQICDKYFKLHDGVYKWFD
ISFDHFGRTTTPNQTKIAQDIFLKLYRNNYLTEDTMEQLLCEHCKIFLADRFVEGTCPLC
GYEDARGDQCDKCGKLVNAVELKSPRCKMCRHAPVIKTSKHLFLNLPLLEDKLTSWMDSV
TSGWTHNARVIANSWVKEGLKPRCITRDLKWGTPVPLEGYTDKVFYVWFDAPIGYLSITA
CYTEEWERWWKNREQVVHYEFMAKDNVPFHSVVFPSSQLGTHDPYTLVNHLVATEYLNYE
DGKFSKSRGVGVFGNNAQETGIPADVWRFYLLYVRPESQDSTFSWSDLMAKNNTELLNNL
GNFANRALSFLEKNYGSCVPAMTLGQEEKMLLVRINRELKQYIALLENAKLRDAIKPIFS
ISRLGNQLMQAAQPWVLIKSTIEEEKAKAGTVIGLCANIICQLSVMLLPYMPNLSAKLQE
QLGVGPDINHLIPEFTCRLPAGHRIGKPAPLFQKIEQVQIDELKKRFSGAQVGSASPGNP
AVATPAPPLAEASNTLETPENLALKVAQQGDKVRQLKAAKAEKAIVTAAVAELLDLKKRL
ATAEEVATKQTNDTPAATTEKPTLTNSVENLTKQVTEQGDKVRGLKTTKADKASIDAAVA
VLLELKKQLALAEGKDPAESSGNATGKSKKKGQQK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgattacacgtcccaacgacttctccggtttgaaaattttactggcatctgaa
ttcctaaatcttcccatcgaattagaagttacgccatcagcggagaaaaccgtactcatc
gtcaatgacgactgccaactcttctcgtgtaacgcagctgtgtggtatctagcttgcctg
agtggccaaaacaaagtcaatttacagcaagataaatggatggactgggaaagtacaacg
ctacatcctgaaattcaggcttttctgaataaacaaccccaacagctcatccctactcta
gaacatcttgataaggctactcgaaacaaatttctcatcggtaattctttgtctgcagct
gacatagtcattttctgttcactaattgtgattagtgattgcaagttcatggcaaattgc
cccaacgtaaccaagtggtttaataatatgtacacaagtgctcaattcaagattgcagcc
tctaaattggacatcaaaattaagcagacagaaccagatcagtgtgaagaggaagaggcg
gccatcagtctagaagacattgaacacgcagtcaaacattggaaaacaagcaatatcaac
aaacctaagccaattactcatcctgtgttaccggttgaaggggaacgaaatgttctaatc
acgagtgccctaccttacgtgaataatttcccacatttgggcaatatcattggctgtgtc
ctctctgctgacgtctttgctcgctactgccgattgcggaactataacacgctgtacatt
tgcgggacggacgagtatggcactgctactgaaaccaaagcattggaagaaggactgaca
cctcagcaaatttgtgataaatacttcaagctccatgatggagtttacaagtggtttgat
atcagctttgaccattttggacgtactactactcccaatcaaacaaagattgctcaggat
atctttctgaaactgtatcgaaacaattacttgacagaagatactatggaacagctgttg
tgtgagcattgcaaaatatttttggctgatcgattcgtggaaggtacttgtcccttgtgt
ggttacgaggatgccagaggtgaccaatgcgacaagtgcggtaagctggttaatgccgtt
gagcttaagtcaccaaggtgcaagatgtgtcgtcatgctcctgtgatcaaaacgtcaaag
catctctttctcaatttgcctctgcttgaagacaaattgacgagctggatggatagtgtg
accagtggttggactcataatgcccgcgttattgccaattcctgggtgaaggaaggcttg
aagccacgctgtattactcgtgacttaaagtggggcacccctgtccctcttgaaggatat
acagacaaggtcttttacgtgtggtttgatgcacccattggctaccttagcatcacggct
tgctatacagaagaatgggaacgctggtggaagaatcgcgaacaggtcgtccattatgaa
ttcatggccaaggacaatgttcccttccattctgttgtttttccgtcttcgcagctcggc
acacacgatccgtatacactggtcaatcatctggttgccaccgagtatctcaattacgag
gatggcaagttctcaaagagtcgtggagtcggggtttttggaaacaatgcccaagaaact
ggcattccagccgatgtctggcgattttacctactttatgtccgtccggaatcacaggat
tcaactttctcgtggtctgatttgatggccaagaacaacaccgaattgcttaataatcta
ggcaactttgctaatcgtgcactgagtttcttggaaaaaaattatggttcctgcgttcca
gccatgacgctaggacaagaagaaaagatgttgctagtccgcatcaaccgcgaattgaag
caatacatcgcgctcctggagaatgcgaaattgcgtgatgctattaaacccatcttcagc
atatcgcgtctaggcaatcagttgatgcaagccgcacagccatgggtgttgattaagagt
acgatagaagaggagaaggcaaaggcgggcacagtcattgggttatgtgccaacataatt
tgtcagttgtcggtcatgttactcccatacatgccgaacctgtctgcgaaactccaggaa
caactcggtgtcggaccagacatcaaccatttgataccggaatttacttgccgtctacct
gctggccaccgaatcggcaagcctgctcctttattccaaaaaatagaacaggtccaaatc
gatgaattaaagaagcggttctctggcgcccaagttggatctgcttctccagggaatcca
gccgttgctactccagcccctccgttggcagaagcctcaaatacccttgaaactccagaa
aatctggctctgaaagtggcccagcagggtgacaaagtgcgccaattgaaagctgccaag
gctgagaaagctattgttacagctgctgtagccgaactgttggatttgaagaaaagactg
gcaactgcggaagaagtagcaactaagcaaacaaatgacacaccagctgcaacgaccgag
aagcctacactgacaaatagcgttgaaaacctgaccaaacaagttaccgaacagggagac
aaagttcgtggtctgaaaaccaccaaagcagacaaagcttcaatcgatgcggccgtcgcc
gttctcctggaattgaaaaaacaacttgctctagccgaaggaaaagatccggctgagagc
agtggtaatgcaaccggtaaaagcaagaagaagggacaacaaaaatag
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