Daphnia magna (water flea): 116927625
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Entry
116927625 CDS
T07514
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmk04131
]
116927625
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dmk04812
]
116927625
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116927625
Membrane trafficking [BR:
dmk04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116927625
Cytoskeleton proteins [BR:
dmk04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116927625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
TIP49
IstB_IS21
nSTAND3
Mg_chelatase
AAA_14
AAA_28
AAA_2
RNA_helicase
AAA_33
AAA_24
Motif
Other DBs
NCBI-GeneID:
116927625
NCBI-ProteinID:
XP_032790548
LinkDB
All DBs
Position
LG1:10094825..10098090
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AA seq
543 aa
AA seq
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MWNLTGKGSSSDIFNRQQQCHIKAYGLVSRALKLDEQNLKDRSLVIDLYTEGIKELESGI
SIQIEGIGESYEKAKRLQEKMRTTLQMARDRLIILKGVSDLHNLPLADQEEELESVEYMP
NHRSTTEIKQQIFDQSKDLASVPHPPGATCSRSGTVRKQAMTPVRRINAAKPNVVSASQS
ANKNSPITKGGGVKCHTAITTIAKTTPPTRLPTVASNRRPALLPTPPRAPASVLTKRTSK
VSTVKGVDSKLVSLILDEIVDGGADVSFGDIAGLQQAKQALQEIVILPSLRPELFTGLRS
PARGLLLFGPPGNGKTLLARALATESSATFFNISASSLTSKYVGEGEKLVRALFGVAREL
QPSIIFVDEIDSLLSERREGEHEASRRLKTEFLCQFDGLRASHEEKILVMGATNRPQELD
EAVLRRFPKRIYISLPDVSARALLLTKLLSKHNNPLCEKQLAKLAQLTDSYSSSDLTALA
KDAALGPIRELGPEKVKFMKTQQLRPISMQDFLDSLKRVRHSVSESSLNVYAKWNREYGD
VSM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatttgactggtaaagggtcttctagtgatatttttaatagacaacaacagtgt
catataaaagcatatggacttgtttcgcgtgctctgaaacttgatgaacaaaacctgaaa
gacaggtccctagtcattgatttgtatactgaaggaatcaaggaattggaatctggaata
agcattcaaatagaaggaattggtgaatcctatgaaaaggctaagaggttacaagaaaag
atgagaaccaccctgcaaatggcaagagatcgcctaattattttgaaaggtgtaagcgat
ttacataatctgcctctcgctgaccaggaggaagaattagaatctgtagaatatatgccc
aaccatagaagtacaactgaaataaaacagcaaatttttgaccaatctaaggacttggca
agtgttccacacccacctggtgctacatgtagtcgctctgggacggttcgaaagcaagcc
atgacacctgtgcgcagaattaatgctgcaaagccaaacgtcgtttctgcatctcaatca
gctaataaaaacagtccaataactaaaggaggaggtgtgaaatgtcatactgctattact
actatcgccaaaacaacgcctccgactagactgcctactgttgcaagcaatcgccgccct
gcacttttgcctacgccgcctagagccccggcctccgttttaaccaagcggacttcaaaa
gtttccacagtaaaaggcgtcgactcaaaactggtatctttaatcttagacgaaattgtg
gatggtggtgcggatgtttcttttggtgatattgccggtttgcagcaagccaagcaagca
ttacaagaaattgttattcttccgtccttaaggcctgagctctttacaggtcttcggtcc
cctgcccgtggtctcctgctttttggccctccaggtaatgggaaaactctgcttgctcgt
gctctcgcaacggagtcgtcagccacgttttttaatatttccgcttcatctttaacttca
aaatacgtcggtgaaggggaaaaactggtgcgggctctttttggggttgccagagaattg
cagccttcaataatctttgtcgacgagatagattctctgctatccgaacgtagagaggga
gaacatgaagcgagccgaagattaaaaacagaattcctttgtcagtttgatggacttcgc
gcttcacacgaagaaaaaatcctggtaatgggagctacaaatcgaccacaggaattagat
gaagccgttctaaggcgttttccaaagagaatatatatcagtttgccggacgtttctgca
agggccctactacttacgaaacttctttcgaagcataacaatccactgtgtgaaaaacag
cttgctaaactcgctcagctgactgatagctattctagttcggatttgacagccctggcc
aaagacgctgctcttggacctataagagaacttggaccagaaaaagttaagttcatgaag
acacaacagcttcgtccgattagcatgcaagatttcctagattctctaaaaagagttcgt
catagtgtatcggaatcttcactaaacgtctatgcaaaatggaatcgtgaatacggagac
gtaagcatgtaa
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