Daphnia magna (water flea): 116927715
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Entry
116927715 CDS
T07514
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116927715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116927715
03036 Chromosome and associated proteins [BR:
dmk03036
]
116927715
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116927715
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116927715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF993
Motif
Other DBs
NCBI-GeneID:
116927715
NCBI-ProteinID:
XP_032790645
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Position
LG7:complement(3635439..3638417)
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AA seq
642 aa
AA seq
DB search
MLEPIGILDNSFIHNKDIGFSWGYGNNLVVFPTEFSKSITMAGMPGSRKNLFMISWERTL
YNPFVRKLVNESCGAFIAIQARVGKETQISVSELIQSSHQYRCIINACIEDLNQAADLAE
TNEATQAIQEMSEIFYKAELVWNLCEIMYLENPLGILPHLLEWVRIHFPNALEETGTVLA
SPTPEFHESFWKALYGLVFQLRIDSAIKLLRIHSGFQTDAFQSAFELLKKMPVFSVNSPV
SAPEFTFRWNHWKEECEARIQAGDFFDSQDLQLLMEILCGKEEAFEKVADFFETWYQRMI
TQLTFTQPTINAASLGDQADPFLAAFTGFDDLSSLDATLLAVLRRDTRKVIGEMQGVLDN
SWFTAHLADLLYHAGALQSFEDINSLQLRETLLRDYAICLFSHQSLWSVGVLYLDHCPTV
GSATLEHLLTRLPCQSELKASKLIALAERRKLTSVVTSVCRVVGWHALKNGRLGAAVAWA
VRAQDAPLATYAADAVLERYLQDSDFTSTDLLDSLGAGLLASDRLAFLGKYREFHRLYSA
NDFHSAANLLISLISSRIAPKYFWTVLLMDALPLLETNPPVFTSDQTYELMQSLQELTSS
FQDDAEPIPHPNCQLNSDKTMLITLALSRNLAKCFVQQTGCD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcccattggaatccttgataattcattcatccataataaagatattggattt
agctggggctatggtaacaacttggttgtatttcctactgagttttccaaatccatcaca
atggcaggtatgcctggttctaggaagaacttgtttatgatttcgtgggagcgaaccttg
tacaatccctttgttcgtaaacttgttaatgaatcttgtggtgcatttattgccatccaa
gctagagttggaaaagaaactcaaataagtgtatctgagcttattcagtccagccatcag
tatcgctgcattataaatgcttgcattgaagatttgaatcaagctgctgatcttgcggaa
actaatgaagctacccaagcaattcaagaaatgagtgaaatattttataaagctgaattg
gtatggaacttgtgtgaaattatgtatcttgaaaatccacttggaattctgccacacctt
ctggaatgggtccgcattcattttccaaatgctcttgaagaaactggaacagttttagca
tctccaaccccagaatttcatgaaagcttttggaaagctctttatggattggtgttccag
ttgcgtatagacagtgctattaaattattaagaattcattctggtttccaaactgatgct
ttccaaagtgcctttgaattgctgaagaagatgccagttttcagtgtgaattcgcctgtt
tcggctcctgaatttacttttagatggaatcattggaaggaagagtgtgaagctcgaatt
caagcgggcgatttctttgattcgcaagatttacagctccttatggagatactttgtggt
aaagaagaagcatttgaaaaggttgccgattttttcgaaacctggtaccagcgaatgata
actcagttgacgttcacacagcccaccataaacgctgcatcactgggcgatcaagcagat
ccatttttggccgcttttactggatttgatgatttgtcgtcactagatgcaaccctttta
gcagttctccgacgcgacacgcgtaaagtaataggggaaatgcaaggtgttttggacaac
tcgtggtttaccgcccatcttgccgatttattataccatgcgggggcgcttcagtcgttt
gaagacattaattctctacaactgagagaaactttgcttcgggactatgcaatttgtctt
ttcagccaccaatccttgtggtccgttggcgtcctctatctcgaccattgtccgactgtc
ggttcagcaacactcgaacacttgcttacgcgtcttccatgtcaatcggaattaaaggcc
tcaaaactgatagctcttgcggaacgacgaaaattaacgtcagttgtaacctcagtttgt
cgcgttgtgggatggcatgccttgaaaaacggacgactcggtgctgccgtcgcttgggct
gtgcgggcgcaagatgcacctctagctacttatgcggctgatgccgttctagaacgttac
ctccaggattccgacttcacttcaacggacttgctagactcactgggggctggacttctg
gcaagcgatcgcttggcgttcttgggaaaatatagagaatttcatcgactttacagtgca
aatgatttccactcagcagccaaccttttgatctctttgatttcttcacgtatcgcacca
aaatacttttggacagtgttgcttatggacgcgttaccattactggaaaccaatccacca
gtttttacgtcagatcagacttacgaattaatgcaaagtctacaagagttaacgtcttct
ttccaagacgacgccgagcccatccctcatcctaattgccaactcaattcagataaaact
atgttaataactctggcattaagtcgtaatttggcgaaatgttttgtacaacaaacaggt
tgtgattaa
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