Daphnia magna (water flea): 116927898
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Entry
116927898 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-PS2
KO
K06584
integrin alpha 8
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04512
ECM-receptor interaction
dmk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116927898
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116927898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dmk04515
]
116927898
Cell adhesion molecules [BR:
dmk04515
]
Integrins
Integrin alpha subunits
116927898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_A_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
116927898
NCBI-ProteinID:
XP_032790832
LinkDB
All DBs
Position
LG1:14872727..14876489
Genome browser
AA seq
969 aa
AA seq
DB search
MRICIRLVAVLTAIAIGAYGFNLDVKFPLKASGIPGSYFGYSLAVHEHNAVKWLLVGAPR
GLNLNNSDVSGALHQCQTRGGDISCTRFTNFPTDMEAANQWLGASVVSRNGTAMVCAPRT
GEKVTGECFYGQGSLPSFTSYMPWNEAFCEVGFSAALSSDGKRFYTGGPSCDLNAGRLIA
STGPDESNPDLLSGDLAFYAYAIAAGNVLNKREGLVASIGFHQNSRFSGKVVLIDSLAGL
RPVSNLVGYQSGEHFGASLAVFDINNDGRDDIVIGAPHHTDYKNSEIKFDVGAVYVYYQT
PKGLYQRGSPYELLLKGQTTGAQFGFAVAELGDTNGDGIKDLAVGAPYENDGSGTVYIYH
GSDLGLRSKAGQVIHGHSFNPPIRSFGFSFVTGGNDFDRNAYSDLIVGAYLSDKVVNLPA
RPVVKVQSEISFDPAFITLEKKECQVPSTTTGSSPVAVSCAKLRYCLVYGGTGVPGNINT
NITVILDVKQPKANRLLFMKTNDNRLTKVIGLTEKNKLCQEEMVYVRPDIRDKLSTMDVN
LVTSLVETPGPLSAILDIYEGKGSSSNFLSIFRDCGSDLICVPDLQMKAVMSSETYIQGS
DERLTIDVEIHNDGEDAFGADFYLHLPPVLSFINTDKEYTDQSILCFPPGEINGLALRCE
VGNPLPAMKTARLRVILQPTPGDDAFVSFLAETNSTNKEDDSTKSDNSELLQLTFKAETK
LALSGWSRPEALVVNMTALQLNESTALPQYTQFYEVQNVGPSDVIGAKFRIVTPTHTPEG
YAISELTAQPTVTEGNANCDPVQLTSNPNVGVINIDCVTEKMNNSERIVIRLNGRLSSEA
LLKQLNTDIFTLRTVMTANIIGLPYGQDGSQIPVVKTEVVVNVTKIKKELNVLKATPWWI
PFVSAVVAVLVAAAIAGVLHRLGFFKRNRPMPMTATLASGPESQPLQETGENPKRPMSEM
DNMVDEESS
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttgcattcgactagttgcagttttaactgccatagcgatcggagcatatggt
ttcaatctagatgttaagttcccattaaaagcatctggaataccaggttcctatttcgga
tacagcctggccgtccacgagcataatgctgttaaatggttacttgttggggcaccaaga
ggacttaatcttaataattcagatgtgtcgggtgctctgcatcaatgccaaacacgcgga
ggggatataagctgcacacgatttaccaactttcccacagatatggaagcagctaatcaa
tggcttggtgcctcggtagttagcagaaacggaacagctatggtatgcgctccgcgcact
ggagaaaaggtgacgggggaatgcttttatggccaaggaagtctgccttcctttacatct
tatatgccttggaatgaggctttttgtgaggtgggtttctcggctgccttatcgtcagat
ggaaaacgattttacactggagggccaagttgcgacttgaacgctggtcgattgattgca
tctactggtcccgatgaatccaaccccgatttactaagcggagatcttgccttttatgct
tacgcaattgcagcaggaaatgtgttaaataaacgtgaagggctcgtagcgtcaatagga
tttcatcaaaattcaagattttcgggaaaagtagttcttatagactctcttgcagggctt
cgaccggtaagcaatttggtaggatatcaatccggagaacattttggagcatcattggcc
gtatttgatataaataacgacggacgcgatgatatcgtcatcggagcacctcatcacacg
gattacaaaaattctgaaatcaaatttgacgtcggcgctgtctatgtgtactatcaaaca
ccgaaaggactctatcaaagaggaagtccttatgagcttcttctaaaaggacaaacaact
ggcgctcaatttggattcgcagtggccgagctgggcgacacgaacggggacggaattaaa
gatttggccgtcggggctccatatgagaacgatggatcaggaacagtttacatttatcac
ggatcggatcttggtctccgaagtaaagcagggcaagtcattcacggacactcgtttaat
ccgccaattcgctctttcggtttttcttttgttacgggaggtaatgattttgaccgaaac
gcctatagtgatttaatagttggtgcctatctgtctgacaaggtcgttaacctccctgct
cgaccggtcgtgaaagtgcaaagtgaaatcagtttcgatccggcatttattacgttagaa
aagaaagaatgtcaagttccatcaacgacaactggtagctcgcctgtagccgtatcttgc
gcgaaactacgatattgtttagtttacggcggcacaggcgttcccggcaacattaataca
aacatcaccgttatattggacgtcaaacagccgaaagcaaatcgtttactcttcatgaaa
actaacgataaccgattgacaaaagttatcggtttaactgagaaaaacaaactttgccag
gaagaaatggtatacgttcggccagatattcgtgacaaactgtcaaccatggatgtcaat
ttagtgactagtttggttgaaactcctgggccactttcggctattctggatatttatgaa
ggcaaaggatccagctccaattttctgtcaatattcagagattgtggatcggatcttatt
tgtgttcctgacttgcaaatgaaagctgtcatgagcagcgaaacgtatattcaaggatcg
gatgaacgcttgactatcgatgtggaaatccataacgacggtgaggatgctttcggtgcc
gatttctaccttcatttaccacctgtgctcagtttcatcaacacggataaagaatatact
gatcagtcaatcttgtgcttccctcccggtgaaattaacggtctcgctttgcgatgcgag
gtggggaatccgctacccgctatgaaaaccgcccggttacgtgtaatattgcaacccact
cccggagacgacgcctttgtctccttccttgccgagacaaacagcacaaacaaagaagat
gacagcacgaaaagcgataacagcgaactgctacagctaactttcaaggctgaaacaaaa
ctggcactcagcggttggtctagaccagaagcgttagttgttaacatgacggctctacag
ctgaacgaaagtacagcactacctcaatatacacaattttacgaagtgcaaaatgtaggt
ccttcagacgttatcggtgcaaaatttcgaatcgtcacacccacgcacacaccagaagga
tacgccataagcgagttaacagctcaaccgacagtgaccgaaggaaatgccaattgcgat
cctgttcaactcacatctaaccctaacgtaggagtcataaatatcgactgtgtcacggaa
aaaatgaacaatagcgagcggattgttattcgacttaacggtcgactgtcttcagaagcc
ctgcttaaacaactgaatactgatattttcaccctacgcacggtgatgacagccaatata
attggtttgccttacggacaagacggttcgcaaattccggtggttaaaacggaagtcgtg
gttaatgtaacaaaaatcaaaaaagaactaaacgtcctaaaagctactccttggtggatc
ccgtttgtcagtgcagttgttgctgtgctagttgcggctgccatagctggggttctacat
cgccttggatttttcaaaaggaatcgtccgatgccaatgacagcaactctggcgtcaggc
cctgaaagccaacctttgcaagaaacgggtgagaatcccaaacgaccaatgtccgaaatg
gacaacatggtagacgaagaatcctcgtag
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