Daphnia magna (water flea): 116927947
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Entry
116927947 CDS
T07514
Name
(RefSeq) RNA-binding protein spenito
KO
K13190
RNA-binding protein 15
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116927947
03041 Spliceosome [BR:
dmk03041
]
116927947
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116927947
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116927947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
DUF5330
Motif
Other DBs
NCBI-GeneID:
116927947
NCBI-ProteinID:
XP_032790886
LinkDB
All DBs
Position
LG7:12924295..12931784
Genome browser
AA seq
767 aa
AA seq
DB search
MKRVSDRDASPFSKRSRSSLGHYDESSEDERGGPPPPRRRRSPSPSHRSRYPLPPDPPVL
RERDDYPPPRSRPPPPSTGYKTLCVSSIHPKASDEVVKDSLYREFKKYGEVSIKLVHGAE
PEDRLAYVSFRNPEDAREARHSKQRIILYDKPAVLEPVYETSAARSTRARSRSYSPLPYR
GEEERYIRPRSPDDRHRMYDDRYDYSLRGYGPPPPAGMYRDYRPPPYDYPPRGPSSYRGH
SYYGAGGHPPVPHYERGSERGGGSRGGGGGGAGGGGGGGGGRNEEGGRGDRNHDRYENKK
DRFPNYLHHIPPEEDPLATRTLFAGNLEINITEEELRRIFGNYGIVEDVDIKRPPPGTGN
AYAFVRFENLDQANRCKVELSGQYIGKFQVKIGYGKATPTTRIWVGGLGSWTSLAQLERE
FDRFGAIKKIEYNKGDTSAYILYETIEAAQAAVQDMRGFCLGGPDRKLKTDFVDTNPPTA
HPPTAKSKGSSSSYDAATARSGAGEDYAGETNWNNGDDPNYRTGSSRTGRGNRSGYEKRP
NAYRGSGAEGDDWPANSSRRPPPDEFDSTRGGSRSPSNERRTDEGGRFTGYRTLAEVARR
SPSNWTGALVLKNSFFPTKLHVTSGEASIADLLLHDEKNQPHLRITQRLRLDPPKLEDVS
RRVSASASHAIFLGLPGSTGGASSPTSDEAAGVQNRPLRNLVTYLKQKEAAGVISLANKN
ADVTGVLYAFPPCQFAADLLRRAAPSLTDEALKDDHLVIVVVKGGTA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtttcagaccgtgatgcgtcgccgttcagtaaacgttcccgttcaagtcta
ggacattatgatgaaagctctgaggatgaaagaggtggaccaccccctccaagacgtagg
cgatcacctagtccaagccatcgttcaagataccctctgcctcctgatccaccagttctg
agagaacgagatgactaccctcctccaaggtctcgtcctccacctccttctactggttat
aaaactctttgtgtcagctcaatccatcctaaagctagtgatgaagtggttaaagattcc
ctgtacagagaattcaaaaagtatggtgaagttagcatcaaattggtgcatggcgctgag
ccagaagataggttagcctatgtttcattcagaaaccctgaagatgctcgagaagccagg
cacagcaagcagagaattatcttgtatgataaaccagctgtacttgagcccgtctatgag
acctctgccgcacggagcactagagcgcgttcgagaagttattctccgttaccatatcgt
ggtgaagaagagcgctatatccggccacgttccccagatgaccgacaccgaatgtacgac
gatcgttatgattattctttgcgtggatatggtcctccaccgccagccggcatgtacaga
gactatcgccctccgccatacgattatcctccacgcggaccgtcgtcttaccgtggtcac
tcttactatggagccggaggacatccacctgttccgcattatgagagaggaagtgaacga
ggtggaggtagtcgaggtggcggaggaggaggtgctggaggtggtggtggtggtggtggt
ggtcgtaacgaagaaggaggaagaggagaccgaaatcatgatcgctacgagaacaagaaa
gatcgtttccccaattatttgcatcacatcccgcctgaagaggatccgctggctacgcga
actctttttgctggcaatttggagatcaacataactgaagaagagctgcgtcgcattttc
ggcaattacggtatcgttgaagacgttgacatcaaaaggccgcctcctggcactggcaac
gcttatgcctttgttcgttttgaaaatcttgatcaggctaatagatgtaaagttgaactt
tcgggacagtacatcggcaagtttcaagttaagatcggctatggtaaagccactcctacc
acacgcatctgggttggtggattaggttcgtggacgtctttggctcaattggagcgagag
tttgatcggttcggcgctatcaagaagatagagtacaacaaaggggacacgtcggcttac
attttgtatgagacaatcgaggcagctcaagcggccgtacaggacatgcgtggattttgc
cttggcggtccggatcgaaaactcaagacggattttgttgacacgaatcctcctacagct
catccgcccacagccaagagcaaaggatcgtcttcttcctatgatgctgccaccgctaga
agcggagctggcgaagactacgccggcgaaaccaattggaataatggagatgatcccaac
tatcgaacaggatcgagcagaacgggtagaggcaatcgtagtgggtatgagaaacgaccc
aatgcgtaccgaggatcaggagccgaaggagatgactggcctgccaacagcagccgacgg
cctccgccggatgagttcgactctacccgaggaggttcccgatcgccatcgaacgagagg
cgaaccgacgaaggtgggaggttcactggataccgtactctggctgaagtggccagacgc
tctcccagcaactggacgggcgcattggtactcaagaattcctttttcccgacaaaacta
cacgtaacatccggtgaagcgtcgattgcagatcttttattgcacgacgaaaagaatcag
ccacatttgcgtatcactcagcgattgaggctcgatcctccaaaattagaagacgtatca
cgtcgggtttcggcctctgcttcacacgctatcttccttggattgcccggatctacagga
ggagcttccagtccaacttctgacgaggctgcgggtgtacaaaatcgcccacttcgcaat
ctcgtcacctatctcaagcagaaagaagctgctggtgtcatctcgctagcaaataaaaat
gctgacgtaacgggcgttctttatgccttccctccttgccaatttgctgctgacctactc
cgacgagcagccccatctttgactgacgaggcgttaaaggatgatcatctagttattgtt
gtggtgaaaggaggaactgcttga
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