Daphnia magna (water flea): 116927974
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Entry
116927974 CDS
T07514
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03013
Nucleocytoplasmic transport
dmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116927974
09122 Translation
03013 Nucleocytoplasmic transport
116927974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmk03019
]
116927974
03041 Spliceosome [BR:
dmk03041
]
116927974
Messenger RNA biogenesis [BR:
dmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116927974
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116927974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
HIP1_clath_bdg
GbpA_D3
PB2_627-dom
SelA
Macoilin
M
Motif
Other DBs
NCBI-GeneID:
116927974
NCBI-ProteinID:
XP_032790923
LinkDB
All DBs
Position
LG7:12976996..12977895
Genome browser
AA seq
185 aa
AA seq
DB search
MGDEEIIRRRLLFDGEGTGDERRLNVLLKGFLTWCNSVDSAEETQTSYARMVAQIAQCEF
AATKSLRCCEMNTAEQQHYDDLYNQIEYGIVSAKKDIEATKKELQEARQIRRNKMEYDAL
AAIIQNQPDRKTNQNKLALLRQELEASESECQKLEMKLEQRRKQFHLLISTIQGLQQLLV
DDETT
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaagaaattattcggagaagactgttgttcgatggtgaaggaactggtgat
gaaaggagactaaatgtcctgctaaaaggttttttgacttggtgcaattctgtcgatagt
gcagaagaaacacaaacatcatatgcaagaatggttgcccaaattgctcagtgtgagttt
gccgccacaaaatccttacgttgttgtgagatgaacactgcagaacagcaacattatgat
gatctctacaaccaaatagaatatggcattgtgtcggcaaaaaaggacattgaggcaacc
aagaaagagcttcaagaagccagacagattcgtaggaataagatggaatatgatgcatta
gcagctattattcaaaaccagccggatcgtaaaactaatcaaaataaacttgcattgctg
cggcaagaattggaagcatcagaatctgagtgtcagaaattagaaatgaaattagaacag
cgacgcaaacagtttcacctgctaatttcaactattcagggtttacagcaactccttgtt
gatgatgaaacaacctag
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