Daphnia magna (water flea): 116928056
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Entry
116928056 CDS
T07514
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116928056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116928056
Enzymes [BR:
dmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
116928056
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116928056
Prokaryotic type
116928056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
KdgM
Motif
Other DBs
NCBI-GeneID:
116928056
NCBI-ProteinID:
XP_032791021
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All DBs
Position
LG7:complement(12426348..12428033)
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AA seq
312 aa
AA seq
DB search
MSSQKPSTNFFKPLQSGGLKRSFSEFIDGNKPVEINFAEKKNKVDQAAEANIFEENGSLS
LAQKNRMVFNQTISKIKLQGNKTCALHHNIGHSWFQAIEPEFKKPYFKKLSDFLASERSK
HTIFPPEHLIWSWTHFSDIQDVKAVIIGQDPYHGVGQAHGLCFSVLKGVNPPPSLVNIFK
ELASDIDGFQIPNHGNLSGWARQGVLLLNAGLTVRSGAANSHKDKGWETLTDAVIHWISA
NCEGVVFLLWGAYAQKKASVVDKKKHHLLHAPHPSPLSAHRGFLGCKHFSRCNDLLIKQN
KAPVNWSNLPIE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcaaaaaccttcgactaatttttttaaaccccttcagagtggaggtttaaag
cggtctttttcagaatttattgatggcaataaacctgtagaaatcaattttgctgaaaaa
aaaaacaaagttgatcaagctgctgaagcaaatatttttgaggagaatgggagtctttca
cttgcccagaaaaacagaatggtttttaatcaaacaatttcaaaaatcaaattacaagga
aataaaacttgtgccttgcatcataatattggccactcgtggtttcaagccattgaacca
gagttcaaaaaaccatactttaagaaactcagtgattttctagcatctgaacgatcaaaa
catacaattttccctccagaacatctgatttggtcatggactcatttctctgatattcaa
gatgttaaagcagttattattgggcaagatccgtatcatggagttggtcaggctcatggt
ttatgcttcagtgttttaaaaggtgtaaaccctcccccaagtttggtgaacatctttaaa
gaattggcttctgacattgatggatttcaaatccctaatcatggaaaccttagtggatgg
gctaggcaaggtgtactactactcaacgctggcttaacagtgcgatccggtgcagcaaac
tcacataaggacaaaggttgggaaacactgacggatgccgtgatacattggattagtgcc
aactgcgagggcgtcgtttttcttctgtggggtgcatacgcccaaaagaaggcttcggtt
gttgacaagaagaaacatcacttactacatgcaccacatccgtcgccactctcagcacat
cgcggatttttgggatgtaaacatttttcccgatgcaatgaccttcttatcaaacaaaac
aaagctcctgtcaactggtctaatcttccgattgagtga
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