Daphnia magna (water flea): 116928115
Help
Entry
116928115 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: rho-related BTB domain-containing protein 1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116928115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116928115
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
dmk04031
]
116928115
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
116928115
GTP-binding proteins [BR:
dmk04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
116928115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
BTB_KLHL33
TCL1_MTCP1
Motif
Other DBs
NCBI-GeneID:
116928115
NCBI-ProteinID:
XP_045034221
LinkDB
All DBs
Position
LG1:16313699..16329509
Genome browser
AA seq
727 aa
AA seq
DB search
MMDNELSNQELVKCVVVGDTAVGKTRLICARACNKKVSLSQLLNTHVPTVWAIDQYRIYK
EVLERSWEVVDGVNVSLRLWDTFGDHEKDRRFAYGRSDVVLLCFSIGNPKSLRNCKAMWL
PEIRRFCPNTPVLLVGCKNDLRFMYCDETYLSYFKDRNPFMRPTKECDLVMPDQARAIAS
DLGLPYYETSVLTYYGVNSVFENAIRAALVSRRQQRFWLAGFKRVQRPLLQAPFCPPKPL
YPDIYVSASTYFENFQTLYARQAYTDVIFITGSVGFSAHRFYIAAAAPSLARLIATATAN
SDINCSDIGTRSSSDCSMVSSVGDTSASGGSSYHSEETECLLDVDRTHYLRLSNRIKEKL
KRRCSFQLSSTSSAYANELRCPQFSREIYHPAVQSISVEQCQGMDHRGRPCVSTQTVVTL
TKIVTPNAMRQCLCFIYTGQIDTRLCPLQSLPMSLLLEIRQAAEFLDLPELLAFIHNVHI
HEEFLNNDIIRSRLLELSLNQGLYADVHFLLDNGTCPAHRPLLMARCDVMDAMFAGDFRE
SSAKVVQMPGVSETTFRQLLHYIYTDRIPPLQAISCVPLVELANRLCLSRLVQLVESYMV
TEMQRIIDAGGEVAMECLMLLEPCQIHNADQLADWCLTYLSTNYNMMCRKAPKILKALHS
ENQAHLAHHRWPPVWYLKERDFYDKYIAERKKEEGLSKPLKRSRNNSGCLCFVGKTRRSD
DSSYHAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatggataatgagctatcgaatcaggaattggtgaaatgtgtggtggtcggcgatacg
gccgtcggcaaaacgcggctcatctgcgcccgggcttgcaataaaaaggtttctctttcg
cagcttctcaacacgcacgttccgaccgtgtgggccatcgatcagtaccgcatctacaaa
gaggttttggaacgctcttgggaggttgtagacggcgtgaatgtctcgctgcgactgtgg
gacacatttggcgaccatgaaaaggaccgtcgtttcgcctatggaagatcggacgtggta
ttactctgcttctcgatcggcaacccgaaatcgttgcgcaattgcaaggccatgtggctt
ccggagatccgccgcttttgtcccaacacgcccgtcttgctcgtcggatgcaagaacgat
cttcgcttcatgtactgcgacgagacttatttgtcctacttcaaggatcgcaatccgttt
atgcggccgaccaaagaatgcgacctcgtcatgccggaccaagcgagagccatcgcatcc
gacctcggccttccttactacgaaaccagtgtgttgacctattatggggtgaactctgtt
ttcgagaacgccatccgggccgctttggtctctagacgacaacagaggttttggctggcc
ggtttcaaacgcgtccagcgaccgttactccaagctccgttttgcccgcctaaaccgttg
taccctgatatatacgtctcggccagcacttattttgaaaattttcaaacactctatgct
cgccaggcgtacaccgatgtgatattcatcacgggaagcgtaggcttttcggcgcatcga
ttctacatcgcagcagcggctccttccctggcgcggctaatcgccacagcgacggccaat
agtgatattaattgctcggatattggcacaagatcctccagcgattgcagcatggtcagc
agcgtgggcgacacctcagcgtcgggcggtagcagttaccacagcgaagagactgaatgt
ctgctggacgtcgataggactcattatttgcgtctatcgaatcgcatcaaggaaaaatta
aagcgtcgctgcagttttcagttgtcgtccacttcttccgcgtatgccaacgagctccgc
tgcccgcagtttagccgtgaaatttaccatccggctgtccagtcgatcagcgtggaacaa
tgccagggaatggaccatagaggtcggccgtgcgtgtcaacgcagacggtagtgacgctg
accaaaatcgttacacctaatgccatgcgtcaatgcttgtgtttcatctacacgggccag
attgacactcgtctctgtccactccagtcgcttccgatgtctttgctgctggaaatccga
caagcagcagaattcctcgaccttcccgagctgttggcttttattcacaatgttcatata
cacgaagagttcctcaataacgatatcattcgatcccggttactggaactcagtttgaat
caaggcctttacgccgacgtgcactttctgcttgataatggaacttgtcctgcccatcga
ccgcttctaatggctcgttgtgacgtcatggacgccatgtttgccggcgatttccgtgag
agttcagccaaagtggttcaaatgccgggcgtgagtgagaccactttccgccaattgttg
cattatatctacacggacaggatcccgccattgcaggctatttcctgtgtcccattagtc
gagttggctaatcggttgtgtctgtcccgtttggttcaattggtcgaaagttacatggta
actgaaatgcagagaatcattgacgctggcggcgaagttgccatggagtgcctcatgctc
ctcgagccttgccagattcacaatgctgaccagctggcagattggtgcctgacttacttg
tcgaccaactacaatatgatgtgtaggaaagcaccgaaaattttgaaggccctgcattcg
gagaaccaggcacatcttgcccatcatcgctggcctcctgtctggtacctgaaggaacgc
gatttttacgacaagtatattgccgaacgcaaaaaagaagaaggcctaagcaaacctttg
aaacgcagccgaaacaattcgggttgcctctgttttgttggcaagacgagacggagtgac
gacagcagctaccacgcagtttag
DBGET
integrated database retrieval system
