Daphnia magna (water flea): 116928416
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Entry
116928416 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116928416
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dmk01007
]
116928416
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmk03016
]
116928416
Enzymes [BR:
dmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
116928416
Amino acid related enzymes [BR:
dmk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
116928416
Transfer RNA biogenesis [BR:
dmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116928416
Prokaryotic type
116928416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
116928416
NCBI-ProteinID:
XP_032791389
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All DBs
Position
LG8:2332904..2336589
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AA seq
1004 aa
AA seq
DB search
MFQRIALLAKFSRLRRSTRCTCLYHSSSSSKEIRETFLDFFAREHLHSRVPSSSVVPYGD
PSLAFVNAGMNQFKPVFLGQAVPQYQRAVNSQKCIRVGGKHNDLDDVGRDGYHHTFFEML
GSWSFNDYFKKEACSMAWQLLTEVYQIPPKKLFVTYFGGNESLGLPSDEECREIWLSLGV
AADHILPFGMKDNFWEMGLVGPCGPCSEIHVNRAGLETGLAKALVNQGSEDVVEIWNLVF
MQYNRISNHILEKLPSHHIDTGMGLERLVAFLQNKKCNYETDLFLPLINAVHRVSRGVPY
QGCYDMVTAQGQRDWAYRLLADHSRMITVALADGAFPDNNHRLRRVMRQALVTSRKWFNQ
DASLLLELSNRVAEMMGGVYPELSRNLSNVHMLLRFEEDIFRDHLSKSGREWSGIINQFP
ELSALPVDQQPGLIAGLKQLEDWRSSSRSDKVPGSLAFKLYSTHGLQEDSMQLLAQLKGW
NVDWPEFHRFMAAERMNTKIQSTAAANNSHFQCGFINVASTNWQCHDVHTRNSEGRYIFK
PLDATVTALISHDGRLIDAATTGDKIAVIADKSCFYYEAGGQVSDTGRLLWPSGSAQVKE
VRPVGDHIYHLVEVNEGNLRINQAVQMVLDEGNRLDTMANHTATHLLQAAIKDILKVTCQ
KSSHVTPTHFRFDFGLFQSEFTVEMISQAESSVRNWIRQCLAVDRLMLPLHQAVSLDGIT
LVPGENYPDMVSVIRIVQEERGKSEAISLEPCCGTHVRNTADLEEFAILSIKSAGIGSRS
IRAVTRSVAKQAHRRAEDLQREMNLLEDVVNGNPIEFSQLKELDKSLKQFREAINSDDLP
VVVIKQLAVRLEKLESFIRQVAQETLARMMHRQVEAAISDAGPASFVIVYLSIPAEVLEI
GRAKLSLIKATRHCPHKPILVLAWDEGCLIGRCTVPQEMVTPNFDAEKWGKCVIAVIGGK
GSSPKGQDPRFSYNVRSRKLTNDVKESVEHQVLLLASDYAKRSL
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacgcatagctttgttggcaaaattcagtcggttgaggcgatcgacaaggtgt
acatgcttgtaccattctagttcgtcctccaaggaaattcgagaaacattcttggatttc
tttgcccgcgaacatttacatagtcgagttccctcgagttctgtggttccatatggagat
ccttctttagcttttgtaaatgcaggaatgaatcagttcaaacctgtcttccttgggcag
gctgtgcctcagtaccaaagagctgttaacagccagaaatgtatcagagtaggtggaaaa
cacaatgatttggatgatgtcggaagagatggttaccaccacacatttttcgaaatgctt
ggatcttggtctttcaacgactacttcaaaaaagaagcctgcagcatggcctggcagttg
ttgactgaggtctaccaaattccacccaaaaaattattcgtcacatattttggtggcaat
gagtcacttggtctaccatcagatgaggaatgcagggaaatttggctttcacttggtgta
gctgctgatcatattctcccatttgggatgaaagacaacttttgggagatgggactagta
ggtccttgcgggccgtgtagtgaaattcacgtcaatagagccggcttggaaacaggactc
gccaaagcattggtaaatcaaggaagcgaagatgtggtagaaatttggaatttagtattc
atgcaatataacagaatatctaatcatatcttggaaaaattaccttctcaccatattgac
accggcatgggcttggaacggttggtggctttcttgcaaaataaaaaatgcaactacgag
acggatctatttctacctttaatcaatgccgttcatcgggtttcacgtggagttccctat
cagggttgttacgatatggttaccgcccagggtcagcgtgactgggcgtatcgattactt
gctgatcatagtcggatgatcacagtggcattggcagatggcgcattcccagataacaat
catcgcctgcggcgggtgatgcgacaagcgttggttacaagccggaagtggttcaaccaa
gatgcgtcattgttgttggagctaagcaatagagttgctgagatgatgggtggagtgtac
ccggaactaagtcggaatctaagcaacgtccacatgcttctgcggttcgaagaggatatc
tttcgcgatcacctgtccaagtctgggcgcgaatggtccgggatcatcaaccagttccca
gagctgtcggctcttccagtagaccagcaacccggactcattgccggactcaaacaattg
gaagactggagaagctcttcccgcagcgacaaggtacccggttcgctcgccttcaagctt
tatagcacccacggtctgcaagaagattccatgcaattattggctcagctgaaaggctgg
aatgtcgattggccagaattccatcggtttatggccgctgaacggatgaataccaaaatc
caatcgaccgcagctgcaaataactctcatttccaatgcggcttcatcaatgttgcgtca
acaaattggcaatgtcacgatgtgcacactcgtaattccgagggtcgttatatttttaaa
cctttagacgccactgtcacagccctcatcagtcacgatggacgtctgattgacgctgct
acgactggtgataaaattgccgtgattgcggacaagagctgtttctactacgaagctggc
ggtcaagtgagcgacactgggcgcttactttggccaagcggttcagcacaggtaaaagaa
gtccgtcccgtaggcgaccatatttatcatctggtggaggtcaacgaaggaaacctccga
atcaatcaagcagttcaaatggtgctggacgagggcaacaggctcgatacaatggctaac
catacagccactcacttgctgcaagctgcaatcaaagacattttgaaagtcacttgtcaa
aaatccagtcatgtgacacccactcatttccgtttcgactttggcctttttcaatcggaa
tttactgtagagatgatatcacaagcggaatcgtctgtccgaaactggatacgtcagtgt
ctagctgttgaccgattgatgttgcctctccaccaggccgtgtctctcgacgggatcacg
ctggtgcccggcgagaattacccggatatggtctccgtcattcgaatcgtccaagaagaa
agagggaaaagcgaggccattagtctagaaccttgctgcggaactcacgtccgcaatacg
gccgatttggaagaattcgccattttgagtatcaaatctgctggcattggaagtcgttcc
attagagccgttacccgttcggtagccaaacaagcacatcgcagagcagaagatttgcaa
cgtgagatgaatctccttgaagacgttgtcaatggtaaccccattgagtttagccaactg
aaggagttggataagtccttgaaacaatttcgtgaagctatcaatagtgacgatttacca
gtagtggtcattaagcaactagccgtccgattagaaaaattagaatcgtttattcgacaa
gttgcacaggaaacattagcgagaatgatgcatcgccaagttgaagcggctatctctgat
gcgggtcccgcatcatttgttatcgtctacctgtcaataccggccgaagtgttggaaatc
ggtagggcgaaactctctttgatcaaagcaacccgacactgtccacacaaaccaattcta
gtcttggcttgggatgaaggatgtttgatcggtcgatgtacagttcctcaggaaatggtc
acgccgaatttcgatgccgagaaatggggcaagtgcgtcatagccgttatcggaggcaaa
ggtagctcgcctaaaggtcaagatcctcgattcagctataatgtacgtagtcggaaatta
accaacgacgttaaagagtcggtcgagcatcaagtgctattgctggcgtcagactacgct
aaaagatcattgtaa
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