Daphnia magna (water flea): 116928566
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Entry
116928566 CDS
T07514
Name
(RefSeq) double-strand-break repair protein rad21 homolog
KO
K06670
cohesin complex subunit SCC1
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmk03036
]
116928566
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116928566
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
116928566
NCBI-ProteinID:
XP_032791554
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Position
LG1:complement(7194535..7198229)
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AA seq
753 aa
AA seq
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MFYAHFVLAKKGPLARIWLAAHWDKKLTKAHVFETNIQKSVEDILHPKVKIALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEENREAAVQAITLPEVFHDFDAN
VPDLNDAEMQAQFTLNQSRAEEITMREDYGCQLPPLNHDEEGFGDLGFGDSGPLEMIRDG
SSIDHSLEPGSFFSEVRDRNESRRNRPSSSIRQRSEADTPIRDDGFGGNLGHDEIGGGLF
EGGGLFDDAPIGDVPSLNEPSDLDIKVGMKSRENLENVNGPNQDSDDDGIDAYGGPPSVG
GSSSSSRPVSPFGGPVSTSMSHPPVSPRSPTRASGEINNLDQGTASIPEGDDQVPGANAD
QTTLLQNEEEGFALAPVDTTTVKGWARHKRKRKLIVDEVKNISGEEMKSQLSDTSDIVTT
LDLAPPTRRLMHWKETGGVEKLFALPGRSIPARSLFRDYQRHLTSQPTENDDFGLTPEVE
KENVPLETVRATEVVESFRQDFPEAPTPQPVKRTVGRKRKAPVDLEAEAEEHQKRREVQY
QSLLAPSTQSSPVPTAVPPSEMGDHSFPQFSLPALPEVQATEPLHAPITQPEPVESSFAD
ASRALSEMENMGYDQNMGNLGLDVTESFTNLPPQTPGAISERAPPTPWHDDYEMAPSVGP
LDEQLADETYEQFEERVVNKRAAAMYNLVRAKMQLNDTIPFTEMAFRNNKKQVAQKFYSL
LVLKKNQVLELSQPKSYAEIMVTQGPKFDSPSL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccattttgttctcgcaaagaaaggacctctagcaagaatttggttagct
gcccattgggataagaaattaaccaaggcacatgtctttgaaacaaacatccaaaaatct
gttgaagatattttacatcctaaggtcaaaattgccctcagaacttcaggtcatttgctt
cttggtgttgtgagaatatactcccgtaaagccaaatacctattggctgattgcaatgaa
gcctttgttaagattaaaatggcatttaggcctggtatggttgacttgcctgaagaaaac
agagaagctgcagttcaagccatcaccttgcctgaagttttccatgattttgatgcaaat
gttccagacctgaatgatgctgaaatgcaagcacagtttacccttaaccagtccagggct
gaggaaattactatgcgtgaggattatggctgccagttaccacccttgaaccatgatgaa
gaaggttttggtgatcttggatttggagattctggtccccttgaaatgatacgagatggt
tcatcgatagaccattcactcgaacccggaagtttcttcagtgaagtgcgtgatcgcaat
gaatctcgcaggaatcgtccgtcttcatcaattcggcaacgttccgaagcagacacgcct
attagagatgatggttttggtgggaaccttgggcatgacgaaattggtggaggtcttttt
gaaggtggtggtctgtttgatgatgccccaatcggtgatgtaccatcattgaatgaaccg
tctgacctcgatatcaaagtaggaatgaaaagtcgagaaaatctggaaaatgtcaatggg
cccaatcaagattctgatgatgacggcattgatgcttacggaggaccaccatccgtaggt
ggaagtagttcatcatcacgacctgtcagtccgtttggtggtcccgtatctaccagtatg
agtcaccctccggtgtcacccagatctcccacacgtgcttctggtgaaattaataacctt
gaccaaggtactgccagcattccagaaggcgatgatcaagtaccaggcgctaatgctgac
caaactacacttcttcaaaatgaagaagaaggctttgctcttgcccctgttgatacgact
acagtcaagggatgggctcgtcacaaacgcaaaaggaaacttatcgttgacgaagttaaa
aacatatcaggagaagaaatgaaatcacagctctcagatacatccgacatagtgaccact
ctggatttggccccacctacgagaagacttatgcactggaaagaaaccggaggagtagaa
aaactttttgcacttcccgggaggtcaataccagcccgctcgttgtttagggattaccaa
aggcacctcactagccagccaacagaaaatgatgacttcgggctaacgcctgaggtggaa
aaggaaaatgttcctttggaaacagtgcgcgccactgaggttgtcgaatcgtttcgtcaa
gactttccagaagcgcctacacctcaacctgtaaaacgcacagtaggacgtaagcggaaa
gctcctgttgatttggaggccgaggctgaggaacatcagaaacgaagagaagttcagtat
cagagcttactagcaccgtcaacacagtcatctcctgttcccaccgccgttccgccatca
gaaatgggagatcattcattcccgcaattttcacttcccgctttacctgaagttcaggct
acagagccattgcatgctcccatcacccagccagaaccagttgaatcttcattcgcagat
gcctcaagagcattatccgaaatggaaaacatgggatacgaccagaatatgggaaatctc
ggtttagatgtcactgaatcttttacaaatttgcctccacaaacgcctggagctatttct
gagcgtgcaccccctacaccttggcatgatgactacgaaatggcaccatcagttggtccc
ttagatgagcagttggcggatgaaacctatgagcaatttgaagagcgcgttgttaataag
cgagctgcggcgatgtataaccttgtgcgtgcgaaaatgcagctaaatgacacgatacct
ttcacggaaatggctttccggaacaacaagaaacaagttgcccagaagttttactctcta
ctggtcctgaagaaaaaccaggttcttgagttatcacaacccaagtcttacgctgaaatt
atggttacacaggggcctaaatttgattcgccgtccttgtga
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