Daphnia magna (water flea): 116928575
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Entry
116928575 CDS
T07514
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116928575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116928575
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116928575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WD40_like
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
116928575
NCBI-ProteinID:
XP_032791559
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Position
LG8:complement(2273392..2275760)
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AA seq
545 aa
AA seq
DB search
MASFKKTQIRSLPKIGQKVTADTLYWRKLNFPVTVKEFGPIDYIDVMPIEPYFIAVSSAA
KVQIYNPITHQVHRHFTRFKEAAYGASIRSDGKLVIAGCDEGHVKLFDIGSKSLLRIFKG
HKGPVHRCKFTTDNVHVVSFSDDKSVALWDLPSETEIIKFSEHSDYVRAGCVSSISSDLF
LSGSFDHTVKLYDARSPTGSTISVDHGSPVESVLMYPSNSIFVSVGGTELRVWDMLAGGR
LLARVSQHHKTITCLHLASDGKRLVTGGLDRHAKIYDVQSYQVVHTLDFPSPVLSLGITP
DDFTVVAGMANGLISMQHRQTQAEARALNPKQSLKVQKKSQTAYRFRLNADFRSVNRTFN
PATDVEVATKTDTNFVSRYDMFLRKFQYSKALDTVLTPYIRKKKPAITVGVMHELIRRNG
LKSALAGRDDSSLSSILTFLARNINDPSHANIIIQVANTLLEIYESSSLTPQSEKLFLQL
QEHVNREVEYVKHLMEIEGMLHILLASTTTQARRSSTYAVQGSPVKPMLPSAAAAANATM
IFNVG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaagaaaactcaaatcagaagtttgccaaagattggacaaaaagttaca
gcagatacattgtactggagaaaattaaacttcccagttactgttaaagaattcggacca
attgattacatcgatgttatgccaatagagccatacttcattgcggtttctagtgctgca
aaagtacaaatatacaacccaatcacacatcaagttcacaggcatttcacacgatttaaa
gaggcagcttatggagcttccataagatcagatgggaaactggttattgctgggtgtgac
gaaggacatgtcaaactgtttgacataggctcaaaatcactgttacggatttttaagggg
cataaaggacctgttcatcgctgcaaatttacaacagataatgttcatgttgtaagtttc
tctgatgacaaatctgttgcattgtgggaccttccaagtgaaaccgaaataatcaaattc
tcagaacattcagactatgtgagagcaggatgtgtttcaagcattagttcagatcttttc
ctgtctggttcatttgatcatacagtaaaactgtatgatgccaggagtccaacaggtagc
accatttcggtagaccatggttcccctgtggaaagtgttctcatgtatcccagcaattct
atttttgtttctgttggtggaactgaactcagagtttgggatatgttagccggcggtcga
ttacttgcgagagtgtcacagcatcacaaaaccattacgtgcttacatttggcatcagat
ggaaagcgtcttgtaactggtggtctggaccgccatgctaagatctatgacgtccaaagt
tatcaggtggttcatacccttgatttcccctctccagtgcttagtttgggtatcacgcct
gacgatttcactgtggtagctggcatggcgaatggtttaatctcgatgcaacataggcaa
actcaggctgaagccagagctttgaatccaaaacagtctcttaaagtacagaagaagtca
caaaccgcctatcgctttcgtttgaatgccgattttcgatcggtcaatcgaactttcaat
ccagccacagatgttgaggttgccacgaaaactgacacgaattttgtgtcccgatacgat
atgtttcttaggaagttccagtacagtaaagcactagatacagttttaaccccgtacata
agaaagaagaaaccggccattactgtgggcgtaatgcatgaactaatacgacgaaatggc
ttgaaatctgccttagccggtcgtgatgatagttctttgtcatctatattgacttttttg
gcccgaaacatcaatgacccaagtcacgcaaacattataattcaagtggcaaatacccta
ttagaaatatacgaaagcagtagtttgacacctcagtcagaaaagctgtttcttcaacta
caggaacatgttaaccgagaagtcgagtacgtgaagcatttgatggaaattgaaggaatg
cttcatattttgctcgcctcaactaccacacaagcaagaaggagttctacctacgccgtg
caaggttcacccgttaaacctatgcttccgtctgctgccgccgctgcaaatgcgactatg
attttcaacgttggatag
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