Daphnia magna (water flea): 116928590
Help
Entry
116928590 CDS
T07514
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116928590
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116928590
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
90S particles
Helicases
116928590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Ant_C
AAA_11
Motif
Other DBs
NCBI-GeneID:
116928590
NCBI-ProteinID:
XP_045033995
LinkDB
All DBs
Position
LG8:complement(78880..82024)
Genome browser
AA seq
889 aa
AA seq
DB search
MSRGCSDLDSGGPSFGVLQMETEMKSPNSSTEKKINSQGSEKTKKKKNSKGKLHPGRVKT
SAIEQHEIKNLEIRYTAVETSAIQKFRDIPLSKKTLQGLKQNEYVTPTDVQKESIVLALR
GMDVLGAAKTGSGKTLAFVIPVLERLYCLQWTRLDGLGALIITPTRELAYQIFETFRKVG
IQHDFSAGLIIGGKDLNFERKRLDQCNIMICTPGRVLHHMDENPLFDCSNLQILVIDEAD
RCLDLGFQQTMNGIIENLPPKRQTLLFSATQTKSVKDLARLSLKDPVYVSVHEHAQYSTP
ESLRQSYIITPIQNKIDILWSFLRSHRKKKLIVFLTSCKQVRFIHQAFTRLRPGLPVLAL
YGTMHQMKRMSVYEEFCEKETAVLFATDIAARGLDFPNIDWVLQMDCPDDASSYIHRAGR
TARYQKGGESLLMLLPSEEAMVEQLAQKKIPIQKIEVNPAKLFSIQRKLEAMLARDVELK
QMAQRAFVTYAKSIFLMKDKSIFDVTAIDLNALARSLGLALAPRVRFLQKHLKATTTAEP
PQAPRMLKPNYDSPDNKEVGVESSEQKWRRNDLEAAYNFHAENEEQDSDSDEGIFKLKRK
DHALPGVVESEEEVAVEKKKKEKILTKEKVAKRILAKKLKANKIVNFDDDGNRIYDASRE
KVSELGRNLEIEALMSVTGGINLDEAKRAMEEEDKYDKELFRQRIKAKHREDRLKAKAER
RLANRVDKEDEKSVDDEEEDEEDEEDEESLDGSVADIIDALPDPDRIYGSNQGGSDEDGD
VYRGPAVAKKRTRLSESEDDDEEYSDDESEEEEVPIKQKTISKYDIRKRSQSSGDDDNQD
QPSPTKTKKKWVKKKPPKKQKPAKINKFDTGLDLAMDEELALHILGSKN
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtggttgctctgatctggattctggaggtcctagttttggtgtgttgcaaatg
gagaccgaaatgaagtctcccaatagttcaaccgaaaagaaaataaacagccaaggatct
gaaaagacgaaaaagaaaaaaaactcaaaaggcaagttgcatccaggccgcgttaaaaca
agtgctattgagcaacatgaaatcaaaaacctagaaatacgctacacagctgttgaaaca
tcagccattcaaaaatttagggacattccactttcaaagaaaacgttgcaaggcctcaag
caaaacgagtatgtcacaccgactgatgtgcaaaaagagagcattgttctcgctcttcga
ggaatggatgtgctgggagctgccaagactggcagcgggaaaaccttagcctttgttatt
cccgtccttgaaaggctatattgcttgcagtggacccgactagatgggcttggtgctctg
atcattacccctacccgtgagcttgcatatcagatttttgaaacattcaggaaggttgga
attcagcatgacttttctgctggtctaatcattggaggaaaggatctcaattttgagaga
aaacgattagaccagtgcaacatcatgatctgcacacctggaagagtactccatcacatg
gatgaaaatccattatttgactgctccaaccttcaaatcttggttattgatgaggccgat
cgctgtttggatctcggtttccagcaaacgatgaatggcatcattgaaaatctacctccc
aaaaggcaaacgttgttattttccgctacgcaaaccaagtcggtcaaagatctcgcgcgg
ttgagtttaaaggacccggtctacgtttctgttcatgaacacgcacaatactctacacct
gagtctttacgtcaaagctacattataactcccatacaaaacaaaatcgacattttgtgg
tctttccttcgaagccataggaaaaaaaagcttatcgtttttttgacttcttgcaagcag
gttcgattcatccatcaagcttttacccgtctacgaccaggccttcccgtgttggccttg
tatggcactatgcaccaaatgaagcgcatgtcagtctacgaagagttttgcgaaaaagaa
actgccgtcttgttcgccacggacattgccgcacgaggattagactttcccaacattgat
tgggttcttcaaatggattgcccagatgatgctagtagttatatacatcgagcaggccgg
actgcacgctatcagaaaggaggtgaatcgttgctgatgttgttgccgtctgaggaagct
atggttgaacagttggctcaaaagaaaattcccatccagaaaattgaagtaaaccccgca
aaacttttttctatccaacgcaaactcgaagctatgcttgctcgtgatgtggaattgaaa
caaatggcccagcgcgcattcgtcacttatgcaaagtcaattttcctcatgaaagacaag
tcaatttttgatgtcaccgccatcgatttgaacgctttggcacggtcgttgggtttggct
cttgcaccacgagtccgttttctacaaaaacatttgaaggcaacaacaacggctgaacca
ccacaagctcctcgcatgctgaaaccaaattatgacagcccagataacaaggaagtcggt
gttgaatcgagtgagcagaagtggaggaggaatgacttggaagcagcttataatttccat
gcagaaaatgaagaacaggattccgacagtgatgaaggcattttcaaactcaagcgcaaa
gaccacgcattgcctggcgtagtagaatccgaagaagaggttgctgttgagaaaaagaaa
aaggaaaaaattttgacaaaagaaaaagtagccaaacgcatccttgccaaaaaactcaaa
gccaataaaattgtcaactttgacgatgatggaaataggatttacgatgcctcccgcgaa
aaggtttcagagctcggtcgaaacctggaaattgaagccttgatgtcggttactggcggc
atcaatttggatgaagccaaaagggcaatggaagaagaagataaatacgacaaagaactt
ttccgtcaacgcatcaaagccaaacatcgcgaagatcgccttaaagccaaagcagaacgt
agattagctaaccgggtagacaaggaagacgaaaaatctgtggatgacgaagaggaagat
gaggaagatgaggaagatgaggagagtcttgatggatcagttgcagatattatcgacgct
ttgcctgatcccgatcgcatctacggttccaaccaaggcggcagcgatgaagatggcgat
gtctatagggggccagccgttgcaaagaaacgtacacgactgagcgaaagtgaagacgat
gatgaagaatatagcgatgacgaaagtgaagaggaagaagtacctatcaagcaaaaaacg
atttcaaagtacgacattaggaaacgatcccaatcgagtggcgatgacgataaccaagat
caaccttcaccaacaaagacgaaaaagaaatgggtcaagaagaaacctccaaaaaaacag
aaaccggccaaaattaataaattcgacacaggcttggatctggctatggacgaagaattg
gctcttcatattcttggctctaaaaactga
DBGET
integrated database retrieval system
