Daphnia magna (water flea): 116928595
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Entry
116928595 CDS
T07514
Name
(RefSeq) TATA-box-binding protein isoform X3
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116928595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmk03000
]
116928595
03021 Transcription machinery [BR:
dmk03021
]
116928595
Transcription factors [BR:
dmk03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
116928595
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116928595
RNA polymerase III system
TFIIIB
116928595
RNA polymerase I system
SL1/TIF-1B
116928595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
SOG2
Motif
Other DBs
NCBI-GeneID:
116928595
NCBI-ProteinID:
XP_032791590
LinkDB
All DBs
Position
LG8:complement(64127..71695)
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AA seq
311 aa
AA seq
DB search
MDQMLSSPGFSIPSIGTPLHQPEEDQQILPHNSPIPTPRQQQQNGFGLALPHQQINNSSS
SQNLYSLPGFTPQHMLQPQTPQALMSPAPNRGSSAAIGDSHMHSQGTPAPAGMFGPSTPA
PMTPHTPASADPGIVPQLQNIVSTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREP
RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIVQKLNFPAKFLDFKIQNMVGSCDVKFP
IRLEGLVLTHSQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFDN
IYPILKSFKKQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgttgtctagccctggtttcagcattccttctattggaactccacttcat
caaccagaggaggaccaacagattttgcctcacaatagtccaattccgacaccacgtcaa
caacaacagaatggatttggacttgctttgccccaccaacagatcaataattcttcaagt
tcccagaacctttacagtctaccgggattcacacctcagcacatgttacagccacagaca
ccgcaagccctcatgtcacctgctccaaaccgaggatcaagtgcagcaattggtgattct
cacatgcattcgcaaggaacaccggctcctgccggaatgtttggtccttctacacctgca
cctatgacaccacacacaccagcttctgctgaccctggaattgttcctcaattacaaaac
atagtatcaacagtgaatctgggatgcaaattagatcttaaaaagattgctcttcatgca
cgtaatgcggaatacaatccgaaacgttttgcagctgtgattatgagaatccgtgagcca
agaacaacggccctcatcttcagttctgggaaaatggtatgcacaggagcaaagtctgaa
gaagattcaagattagcagcccgaaaatacgcgcgcattgtccagaaactaaacttccct
gcaaaatttctagattttaaaattcaaaacatggttggtagttgtgatgtaaaattccct
atccgtctagaaggtctcgttctgactcacagccagtttagcagctatgaaccagaactc
tttcctggtctcatttaccgaatggttaaaccccgtattgtgttattgatttttgtttca
gggaaagttgtgcttactggcgccaaagttcgtcaagagatctatgatgcattcgataac
atctaccccatcttaaagagtttcaagaagcaatag
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integrated database retrieval system
