Daphnia magna (water flea): 116928765
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Entry
116928765 CDS
T07514
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116928765
Spliceosome [BR:
dmk03041
]
Common components
Common spliceosomal components
General mRNP proteins
116928765
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RBD_DEAH11
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
116928765
NCBI-ProteinID:
XP_032791752
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All DBs
Position
LG8:2867284..2870807
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AA seq
558 aa
AA seq
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MDEDIDALLEAAFDKKGSHINSRAALFSLQHRAQGEAEGKVNGESSHRVNGNDTKEKKYD
KERDKDKDREKDNKDREKDNKDREKDNKDREKERDRGKERDKDKDGKDKDRDRRSGRSDR
HRSRSKDRKDRDRRRSRSRDRRRSRSPREARRRSRSPHRDGRKRSRSPRGGKDRERNRGR
RSPTPIKKQLTEMTVEERDARTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLITCNKTRR
FKGLCYVEFAEPESVPLAIALTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKGPNG
PMRLYVGSLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAM
EQLNGFELAGRPMKINHVTEHFTGNHTYLDSDEMDRAGIDLGATGRLQLMAKLAQGTGLE
IPAAAQSALNLQASIQAAQQQALPVAAVAPPIATQCFMLSNMFDSSSETHPLWHQEICDD
VMDECNKHGGVLHIYVDKASPQGNVYVKCPSVTVAVNAVNALHGRWFAGRIITAAYVPLI
NYHSLFPDSITATTPLRK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatatcgacgctttgttggaggccgcgtttgataagaaagggagccatata
aattcgcgtgctgcgttgttttctctgcaacatcgtgcccagggcgaagcagaggggaag
gtcaacggggaatcttctcatcgcgtgaacggaaatgacaccaaagaaaaaaaatacgat
aaggagcgtgataaagacaaggaccgagaaaaagataataaagatcgagaaaaggataat
aaagatcgagaaaaggataataaagatcgagaaaaggaaagagacagaggaaaggagcgt
gataaagacaaggatggaaaagacaaagatcgagatcgccgttcaggacgtagtgaccgc
cacagaagccgaagtaaagaccgtaaagatcgagatcgccgcagaagtcggagtcgggac
cgccgccgttctcgcagtcctcgagaagctcgtcgaaggtctcgtagccctcatcgagat
ggacgcaaacgatctcgcagcccaagaggcggaaaagatcgcgagagaaaccgtggccgt
cggtctccaacgccaatcaagaaacaactaaccgaaatgaccgttgaagagcgtgacgcc
cgaactgtgttctgtatgcagttgtctcagcgcattcgtgccagagatttagaagaattc
ttttctgcggttggcaaggttcgagatgtcagattgattacttgcaataagacacgtcgc
tttaaaggtctttgttatgttgaatttgctgagccagagtcagtccccttggcaattgca
ctgaccggtcaaagattgtgtggtgtgcctattgtcgtgcagcccactcaagctgaaaag
aaccgacttgcaggaagtaacatgcctgcgatgagttcattcaacaaaggtccaaatggc
cccatgcggttgtatgttggatcgctccatttcaatatcacagaagacatgttgcgtagc
atcttcgaaccgtttggtaagatcgaacacatgcagctcatgatcgatacggaaactggt
cgctccaaaggatatggatttatcacgtttcgaaatgccgaggatgcgaaaaaggctatg
gaacaactaaatggatttgaattggctggtcggcccatgaaaatcaaccacgtgacggaa
cactttaccggaaatcatacctatctggatagtgacgaaatggatagagctggaattgat
ttgggcgccactggtagactccaactgatggcaaaattggctcaaggcacagggttggag
atcccagcagccgcacaatcagcccttaatcttcaggcttccatccaagcagctcaacaa
caagcattgcctgttgccgctgttgctcctcccattgccacccagtgttttatgctttcc
aacatgtttgattcgagttctgagacgcatcctttatggcatcaggaaatatgtgacgat
gtcatggacgaatgcaacaaacatggtggtgtacttcacatctatgttgacaaagcatca
ccccaaggtaacgtgtacgtcaagtgtccgtccgtgactgtagcggtcaatgccgtcaac
gctttgcacgggcgctggtttgctggaagaatcatcacagcagcttacgtcccactaatt
aactatcattcgttattccctgactccatcacggccaccaccccattgaggaagtga
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