Daphnia magna (water flea): 116928936
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Entry
116928936 CDS
T07514
Name
(RefSeq) protein jagged-2 isoform X1
KO
K06052
jagged-1
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116928936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dmk04090
]
116928936
CD molecules [BR:
dmk04090
]
Proteins
116928936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
DSL
EGF_DL_JAG
EGF_CA
JAG1-like_EGF2
EGF_2
EGF_Teneurin
EGF_3
EGF_PEAR1L
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
116928936
NCBI-ProteinID:
XP_045033596
LinkDB
All DBs
Position
LG8:complement(3888474..3919685)
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AA seq
1248 aa
AA seq
DB search
MESFWWRRPCRTISDKNRNCSKRKKNCRTLSVSSMSFTSSAMIWIVLLLSTAHLTMANAS
GFFELEVVALENPQGRLANGQCCGADETSSSNSGTCHRQCATHFRLCLKEYQSNVTVSSP
CTYGNASSPVLAGNSFTFVEPGKSNARLVIPFSFRWPRSFTLMLEAIDYNNSTRPSGDAV
SGREIERAVYSGILEPSADWHSLTHEGSAVNRDLRLTYRVRVQCEPNYYNATCTKFCRPR
NDMFGHYECDRNGDKTCMPGWTGATCETAVCKPGCHPINGQCEQPGECRCRWGWKGEFCD
QCVPYPGCKHGYCNGNPWQCICETNWGGILCDQDLNYCGTREPCHNGGTCENTKPDEYLC
KCPDGFSGTNCEVVDNVCATAPCLHGGTCTVAINASFNCSCPPGWTGATCQINVDECLSS
PCLNGATCADLENGYRCQCADGWQGDTCDQDVDECSMAELCRNSLSCENTPGNYTCRCVE
GFHGRQCQYNVNDCDGHQCLNGATCIDLIGQYHCACRPGFNGQRCEINIDECSSQPCANG
GECVDLVDGFKCICPLGYTGAQCQQTDTDLCHPNPCANGSPCFNTLGQLGGPDYYCLCQS
HWQGKNCSRYRQPPPPPPLPASQPSPQTEAGSCWTSKGAGHCVHGRCVASEDGSTFSCQC
DPGYSGHFCTDNVNDCADSPCRNGGTCIDGIDSFHCVCPKGYDGLTCDHNVDDCAANPCR
HNGTCVDLVADFVCRCVDGWKGRTCSNRNQHCQHGENPCLNGATCVDDSNPEAGFTCRCS
SGWRGSICHLAEHMPCDANPCRNGATCLNTGQSFTCVCKDGYEGQHCQMELRQTAASTTA
SPTSCQWSGRLYPDHSSWDDGCNKCQCRAGQAVCTRVWCGAANCLEDPVHKVGKSCGASE
ICLSAQSGCLRPPCPAYGQCRPLKPGRLLPVPATTASCWPNLTGNRLAPTCARLTLVLDR
YRAQPGFSVQSLCGHLRKLAAAQSHLWDDFPGQQQQQLERPSLVILCDLKDHLEDVVQVT
ISMSETSLELGGSRATAAARVLGNVLTAYYKEGSSMGAVVDVKVETPYPDAMESSDTSSQ
NHPSSDSSGSNYVVAIVCAILAGLVVVAGLLLLLLWRLRKRPAHSPSHSVNSSMDRSIEK
SNNLQNEENLRLQQRRMKTLNVAELVDHPAKGSGVPLSKKLSKVVEDAVVVAQEDSSSDE
YSGGQRDVIESNPIYKAPISVDVRNNIHLAARAGQMMDKELSLKVVVV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttttggtggaggcgaccatgtcggacgatttcagacaaaaatcgaaattgt
agtaaaagaaaaaagaattgtcgtacgttaagtgtgtcgtcaatgtcgttcacatcgtcc
gccatgatttggatagtcctactcttatccacagctcacctgacgatggcgaacgcgtcg
ggctttttcgaattggaagtggttgcattggaaaaccctcagggccggctggccaatggc
cagtgctgcggcgcggacgagaccagtagctcaaactctggcacctgtcatcgccaatgc
gctactcatttccgattgtgcctcaaggagtatcagagcaacgtgaccgtctccagtccg
tgcacctacggcaatgcgtccagtcccgtcctggccggcaattcgttcacgtttgtcgaa
cccggtaaatccaacgctcgactcgtcatcccgttttcattccgctggccgaggtccttc
actttgatgctggaagcgatagactacaacaattctacacgaccatcaggcgatgctgtg
agtgggcgtgaaattgaacgggccgtttattcgggcattttggaaccgagcgccgattgg
cattctttgactcacgaaggatcggccgtcaaccgagacttgcgactcacttaccgcgtg
agggtgcagtgcgagcccaactactacaacgccacgtgcacgaaattctgccggccgagg
aacgacatgttcggccactacgaatgcgaccgcaacggcgataagacttgcatgcccggg
tggactggagccacctgcgaaacagctgtttgcaaacctggttgccatcccatcaacggc
caatgtgaacaacccggcgagtgcaggtgtcggtggggatggaaaggtgaattttgcgat
caatgcgtcccgtatccgggatgcaaacacggctactgtaacggcaatccatggcagtgc
atttgcgaaacaaattggggcggcatcctctgcgatcaagatttgaattattgcggaact
cgggagccgtgccacaatggcggcacatgcgagaacacgaaaccagacgagtacctgtgc
aaatgtcccgacggcttttccggcactaattgcgaagtggtggacaacgtctgcgccacg
gctccttgtctccacggcggcacttgcaccgtcgccatcaacgcatcatttaactgttcc
tgtccgccaggatggactggagccacttgccaaattaatgtggacgaatgtctgtcgtcg
ccgtgtctgaacggggcgacctgcgccgacctggagaacggctaccgctgccaatgcgca
gacggctggcaaggcgacacttgcgatcaagatgtggacgagtgttcgatggccgaattg
tgcagaaactcgctgagttgcgagaacacacctggcaactacacctgtcgctgtgtcgaa
ggttttcacggtcgccagtgtcagtacaacgtcaacgattgcgatggccatcagtgcctc
aatggcgctacttgcatcgatctgattggccagtaccactgcgcttgccgacccggtttc
aacggtcaacggtgcgagatcaacattgacgagtgctcgagtcaaccgtgcgctaacgga
ggcgagtgcgtcgacctagtcgacggcttcaaatgcatttgccctttgggctacaccggt
gcccaatgccagcagacggatacggatttgtgccatccgaacccgtgcgccaacggctcg
ccgtgtttcaatacgctcggacagctcggcggacccgactactattgcctctgtcagagc
cactggcaaggcaaaaattgttcacgataccgacagccccctccgccgcccccgcttcca
gccagccaacctagtccacaaacagaagcgggcagttgttggacgtccaagggtgccggc
cattgcgtccacggtcgttgcgtcgcgtcagaagatggttcgactttctcgtgccaatgc
gatccgggctattcgggtcatttttgcaccgacaacgttaacgactgcgctgatagccct
tgccggaatggcggtacctgcatcgacggcatcgattcgtttcactgcgtttgtcccaaa
ggttacgacggactcacctgcgatcacaacgtagacgactgtgcagccaatccatgtcgc
cataacggcacgtgtgtcgatttggtggccgatttcgtgtgccgatgcgtcgacggctgg
aaagggcgcacttgttccaatcgcaaccagcactgccaacacggtgagaacccttgcctg
aacggtgccacttgcgtcgatgactcaaaccccgaagccggattcacgtgtcgctgctcg
agcggatggcgcggctccatctgccatctggctgaacatatgccttgcgatgccaatccg
tgccgcaatggcgccacgtgtttgaacacgggccagtcgttcacctgcgtctgcaaagac
ggatacgaaggtcaacattgtcagatggagctgagacaaacggccgcgtcgacgacggcc
agccccaccagttgccaatggtcgggccgtctgtatccggatcattcgtcgtgggacgat
ggatgtaacaagtgccaatgcagggccggtcaggctgtctgcacgcgcgtttggtgcggt
gcggccaactgcctcgaagatcccgttcataaagtgggcaaatcttgcggagcttcggaa
atttgcctttcggcccagtctggatgtctgcgaccgccgtgtccggcctacggtcagtgc
cggccgttgaaacccggtaggcttttgcccgttccggccaccaccgcctcttgctggccc
aacttgacgggcaatcggctagcgcctacctgcgctcgattgacgctcgtgctggaccga
tacagggcccagccgggattctcggtgcaatcgctgtgcggccacttgcgtaaattggcc
gctgctcagagccatctgtgggacgatttccccggacagcagcagcaacagttggaaaga
ccatctttggtcatcctctgcgatctcaaggaccatctggaggatgttgtccaagtcacc
atctccatgtcggagacgtcgttggaacttggaggaagccgggccacggctgctgcgcga
gtcttgggcaatgtcctgacggcctactacaaggaagggtcctctatgggagccgtggtg
gacgtcaaggtggagacaccctatccggacgcgatggaatcgtcggacacgtcctcgcag
aaccatccgtcatcggactcgtccggcagcaattacgtggtggccatcgtctgtgccata
cttgccggcctcgtcgtcgtggccggtctgctgctgttgctcttgtggcggctgcgcaag
cggccagctcattcgccgtctcacagcgtcaacagctccatggatcgatccattgaaaaa
tcgaacaatctgcaaaacgaggagaatttgaggctgcagcagcgtcgcatgaagacgctg
aacgtggccgagctggtggaccatccggctaaaggaagtggcgtgccgctgtcgaagaaa
ctgagcaaagtcgtcgaagacgcggtcgttgtggcgcaggaagattcgtcctccgacgag
tactctggcggccagcgggacgtcatcgaatcgaatcccatctacaaagcgcccatcagc
gttgacgtgcggaataatatccacttggcggcgagagcgggccagatgatggacaaggag
cttagcctcaaagtcgttgtcgtgtga
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