Daphnia magna (water flea): 116929007
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Entry
116929007 CDS
T07514
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03440
Homologous recombination
dmk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116929007
03460 Fanconi anemia pathway
116929007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dmk04121
]
116929007
03036 Chromosome and associated proteins [BR:
dmk03036
]
116929007
03400 DNA repair and recombination proteins [BR:
dmk03400
]
116929007
Ubiquitin system [BR:
dmk04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116929007
Chromosome and associated proteins [BR:
dmk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116929007
DNA repair and recombination proteins [BR:
dmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116929007
FA (Fanconi anemia) pathway
Downstream FA components
116929007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
BRCA2
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
116929007
NCBI-ProteinID:
XP_032792048
LinkDB
All DBs
Position
LG8:4148373..4154135
Genome browser
AA seq
1569 aa
AA seq
DB search
MNHDNLETTPDRVATNAFRTPVNPKFPIWSPVFHATTPDLNAPASACKGTPALIESLGIN
QELDVSWSATMETPPNNNLSIPGIIKLDVQKMLENKSKLLQPCHLFHNEEKNSSIENDVN
SSIKLTERTHSSERISNLESEEEDAYLNAEDLLKLLNKPVSKFIYPEPIYIKIVGKSQMA
NPIKYLKQQQSGATVAKELSPSALVEKKWQKNVKEVRKSLDFSHDSLIKGHKDISYHTSH
YSNLQQKEATEPRKLSISNSEVSSPCLLGTSKRLFENNLHGPFQIETDEVETITQTNINV
ETIQAPSSCIRQKYCGTVAPQITSESVGFSTADWEKGTYSKIDQPRCKLEGLTENIECHY
QTDRLKPTSVYLMEKKFPEQAWNCSKILHENNHDNSQVTGFNKAKAKDGLSSGEAKGQTL
NNFVDETQLSVVTEYPELVGFSTAGGKKLTISETAMDQARAKLEEIANGDSNFTINPNKR
ENYQKLNDSCGGGVPKKVWNCDQTLLCSSNDASIPLTIGFSTANGKLLAVSEEAMNRGQS
MFSEVSEATPSYAPTYPKTVGFSTASGKKVAVSEKSIAQSRSFFSEFQDLDTEPIDVPLA
SFSMAIGKNIVVSKEAVARGQALLDDVYGTNIEEENSVDSQAQLCRVSDVIEKSTVDSKQ
TSASSVCFKMRSRTSFKAPKKLMPALKSTFPLVENNHAIPLQVPLTVGFNTASGKDVKIS
ESSLCRARKIFEENLLVEDIHNTIEEREHTDKLNPNSSAPCLSVKNENTDQKTKVEDKND
NDCDDYWVSSPTIGKKTKRTKKRNNITHSPQKQLSRTPISGTPSAFESSAVSAKIRALRR
IARQEQMSLIQCKQSKSIKSSIKAGYLYRLKKDEIVPKKTWRELIGKCSLPEMLPPYKLL
EDHGVLTSVCLVRASNASSFNFCAWDHFPIDDCLENSKGMQIGEFLVIFSDENTIGCEEI
GASLLASENVDPTLISWEXIRNHYRWIVWKLASMELRMPSLFAREGLTLSNVLEQLKYRY
DKEIDHCQRSSLRRIIEQDDTAAKTMILCVVEIRSPTILELTDGWYSIEAHCDSAMQQLI
EKNKIFAGVKLVISGAELVSPGPSAPLEKGSDTYLKISANSTRRARWDSKLGFYSKPLPF
PIALASILPDGGVISHIRVHIIRVYPVTYMEKAPDGKTIFRGERQYRRITESAAVRYERM
MEKVVEDIEREEDEQERKRSRADGDRRHKKGINLTDEEKRSRILAEAQKRMQMNMKSVEG
VPMLKIRVIDARATSSNSAIVSIWRPTEELQHHLREGRAYRLYNVNAAGLRFGELQLNAM
KNTLWSDVKQTTDTPLLQSLARSVIPFSTANQLGFKPMFNELDIVGLVVYVGQQQSKGPF
QTAILSDGTTYFGVKCWGSLEDYALADVIVVGSFLAFSNLQWRATACRTASKLQFAFIYE
GTLVSSRPALKHLDTALQDLKQSVKDPNGCVTEAEGQVDVLLGNATPQQATPRYGKEASG
RGGMFTPTGVVCSTNGKKNETPTSSNLTINRARLLEKYPEPPALSPWNGCASPLVRKKFK
PPARKPSAT
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgacaatcttgagactacgcccgatcgcgtagccacaaacgccttccgcact
cctgtgaaccctaaatttccaatatggagcccagtcttccatgcaactactccagattta
aatgctccagcctctgcttgtaaaggcactccagctctaatagagagtttgggcatcaat
caagaacttgatgtttcttggtcagctaccatggaaactcccccaaataataacttgagt
attccaggaataataaagcttgatgtacaaaaaatgcttgaaaacaaatcaaagcttttg
cagccatgtcacttattccacaatgaggagaaaaattcatccatagaaaatgatgtgaat
agttcaattaagttgacggagagaacacattcttctgaaagaatatctaatttagaaagc
gaggaagaagatgcttacttaaatgcagaagacttgctcaaacttctgaacaaacctgtc
tcaaagtttatttatcctgagccgatttacataaaaattgttggaaaatcccagatggca
aatccaattaaatacttgaaacaacaacagtctggagcaacagtggcaaaagagttatcc
cctagtgctcttgttgaaaaaaagtggcagaaaaatgttaaagaagttagaaagagtctt
gatttttcacatgacagtttgattaagggtcacaaggacatttcatatcacacgtcgcac
tatagcaaccttcagcaaaaagaagctactgaacctcgtaagttgtccattagcaattct
gaagtttcttcaccgtgcctcttggggacttcaaagcgcctatttgagaacaacttacat
ggcccgtttcaaatcgaaaccgatgaagttgaaacgattacccaaacaaatatcaacgtc
gaaactatccaggcaccatcgtcgtgtataagacaaaaatactgcggaactgttgcccca
caaattacatcagaatctgttgggttcagcactgccgactgggaaaaaggaacatactcc
aagatagatcaaccaagatgtaaattagaaggtttgacagagaatatagaatgccactac
caaaccgatcgattaaaaccaacttcagtatatctaatggaaaagaagtttcctgaacaa
gcttggaattgcagcaaaattttacacgaaaataaccatgacaactcacaggtgacaggg
ttcaataaggccaaagccaaggatggtctttcttctggcgaagctaagggccaaacctta
aacaacttcgtcgatgaaactcaattgtctgttgtaaccgaatatccggaactggttggg
ttcagcactgccgggggtaaaaaactcaccatctcagaaacagctatggatcaggcaaga
gctaaacttgaagaaatcgccaatggtgattccaactttacaattaatccaaataagcgt
gaaaactatcaaaagctcaacgattcctgtggcggaggggttccgaaaaaagtttggaac
tgtgatcaaacattgctatgcagttccaatgatgcatcaatcccattaacgataggcttc
agtaccgcaaatggaaagctccttgcagtttctgaagaagcaatgaacaggggccaaagt
atgttttccgaagtcagcgaagctacgccgtcatatgctcccacatatcccaaaactgtt
ggattcagtactgcaagcggcaaaaaagtcgccgtttccgaaaagtcgattgcacaatcc
aggtcttttttctctgagtttcaagacttggatacagaacctattgacgttcctctggct
agtttcagcatggccattggcaaaaatatagtcgtgtcgaaagaagctgttgctcgaggt
caagcgctgctagatgatgtttatggaacaaacattgaagaagaaaatagcgtagattcg
caagcacaattatgtcgtgtatcagatgtcattgaaaaatccacagttgactccaaacaa
acatcagcttcttcagtgtgtttcaagatgcggtccagaacttcgttcaaagctcccaag
aaattaatgcctgctcttaaatcaacatttccgttggtcgaaaataaccatgctatccca
cttcaagttccgctgaccgttggatttaacactgcgagcggaaaagacgtaaaaatatct
gagtcgtcattgtgtagagctcgtaaaattttcgaagaaaatcttttggtggaagacatc
cataatacaatcgaagaaagagagcatacagataagctgaatccgaactctagtgcacct
tgtttatctgtgaaaaatgaaaataccgatcagaaaaccaaagtcgaagataaaaatgac
aacgattgtgatgattactgggtgtcatcgccaactattggcaaaaagacgaaaagaaca
aagaagagaaacaatatcactcatagccctcaaaaacagctatctcgaacgcctatctca
ggaaccccgtcggcatttgaatcttccgctgtgtcagcaaagataagagctttaagaagg
attgctcgtcaagaacaaatgtcgctcatccaatgtaaacaatcgaaatccataaaatcc
tcaataaaagcggggtacctctatcgactaaagaaagatgaaattgttccgaagaaaacg
tggagagagttgattggtaaatgttcattaccggagatgttacctccatacaaactgtta
gaagatcatggtgtgttaacgtcagtctgcctcgtccgagcttcaaatgcttcatcattt
aatttttgtgcttgggatcatttcccgattgatgattgtctagaaaattctaaaggaatg
caaattggcgaatttttggtaatatttagtgatgagaataccattggttgcgaggagatt
ggagcaagtttgcttgcctcggagaacgttgatccaactcttatcagctgggaatgaata
cgcaaccattatcgctggatcgtctggaagcttgcttctatggagctaaggatgccatct
ctttttgctcgggaaggactaacactgtctaacgtacttgaacagttaaaatatcgttat
gacaaagaaatcgaccattgccaaaggtcttcccttcgacgcattatcgagcaggatgat
actgcggcaaaaacgatgatactctgtgtggtcgaaatccgatcccctacaattttggag
ttgaccgacggatggtacagcatagaagcccactgtgattccgcaatgcagcaacttatc
gaaaagaacaaaatattcgctggtgttaaactagtaatttctggcgccgaactcgtgtcg
cctggtccatccgctcccctagaaaagggttctgatacctacttgaagatatcagcaaac
tcaacacggcgtgcacgttgggattccaaattgggattttattccaaacccttaccattt
ccaatcgcgttagcctccattctccctgatggaggtgtcatctcccatattcgagttcat
atcatccgggtatatcccgtgacatacatggagaaggcaccagatggcaaaacgatattt
cgtggcgagcgacagtacaggcgaataacagaaagcgcagcagtacgctacgagcgtatg
atggaaaaagttgtagaggacattgagcgagaagaagatgaacaagaaaggaagcgatcg
agagctgatggtgatcgccgtcataagaaaggaatcaatctaacagacgaagaaaagcga
tctcggattcttgccgaagctcagaaacgaatgcagatgaacatgaaatcggtagaagga
gtgccaatgcttaagatacgcgtaattgatgcccgtgccactagttctaattctgcaatc
gtttccatttggaggcccaccgaagaactgcagcatcacttgagggagggacgagcatac
cgtttgtacaatgtcaatgctgcgggtttgcgattcggggaactgcagctcaacgctatg
aagaacactttgtggagcgatgtgaagcagacgaccgacactcctctcctccaaagtttg
gcgaggagtgtcatacctttttctacagcaaaccaacttggcttcaagccaatgtttaat
gagttggatatcgtagggctagtggtttatgttggtcaacaacaaagcaaaggtccgttt
caaacagcaatactttcagacgggacgacttattttggcgtgaaatgttgggggagtcta
gaagattatgccctagccgacgtcattgttgtcggatctttcttggccttttcaaatttg
cagtggagggcaacggcctgtaggaccgcttctaagcttcaatttgcgtttatttatgaa
ggcacattggtcagttccagacccgcactcaagcatttggacaccgcacttcaagacctt
aagcaatcagtaaaggatccaaatggctgcgtgactgaagccgaagggcaggtggacgtt
cttttgggaaacgccactcctcagcaagccacaccgagatacggaaaggaagcgtctggg
agaggtggaatgtttactcccaccggtgtcgtctgctctactaatggtaaaaagaatgaa
acgcccacatcatcgaatctcacaataaaccgtgcaagacttctggagaaatatccggag
ccacctgccttgtcaccttggaacggatgtgcatcaccgcttgttcgaaaaaaattcaaa
cctccagctaggaaaccatctgccacgtga
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integrated database retrieval system
