KEGG   Daphnia magna (water flea): 116929011
Entry
116929011         CDS       T07514                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
dmk  Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dmk01009]
    116929011
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dmk04121]
    116929011
Enzymes [BR:dmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116929011
Protein phosphatases and associated proteins [BR:dmk01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116929011
Ubiquitin system [BR:dmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116929011
SSDB
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-RING_4 zf-RING_11 zf-C3HC4_4 Prok-RING_4 zf-rbx1 zf-RING_10 DUF1272
Other DBs
NCBI-GeneID: 116929011
NCBI-ProteinID: XP_032792054
LinkDB
Position
LG8:4154186..4157964
AA seq 805 aa
MEEWMLNDLLECSVCLERLDISSRVLPCQHTFCKKCLEEIITTQKELRCPECRVLVTTKL
EDLPPNVLLMRILEGMKNVPRTKLAGDTPIAIQPQTQETSHNTNIPIACVLPQQQQQQHP
KIHPDVHGKIESAPKNSVSLHQPCAKALYDYMPQEPGDLGFKKGDIIILKKRVDANWYHG
EKNLSQGFFPASYVQVLTPLPNATVPQCVALYDFKMTAEDEKDCLTFNKGAVVTVIRRVD
ENWAEGRLTERIGIFPISFVEMNSAAKLLMKISTNFQPGPSRSAPALPVTDNLQNSLNSM
TNSVSTSSPSTTPATTSSDSSPSSVTSSVNRVVPREKRFSLNVNQQTHPTQFNRRSIEIS
TRHRGLAVSSSESELQPLVPGVSSPPPSGPPSFMTPPALYIALYPYKPQKADELELRKGA
LYTVSEKCQDGWFKGSSVRTQKIGVFPGNYVQVVRSQPHPQSNPPPPAPIAPQVMTSTRS
NIQASVVHPPPKLPPRALSPAAQNSGSVMSPILSSQGYKPMSTISGSTSSSASVPAAVVA
RLATTPAPAPALSPRATTLISPPPNVAIGGGGVAVGVEPASTPIQPEKKDKEKASVSLMK
RFTCRKKSSPPLLHPYSIDNPVFEDGFNTSVSKTGSNTPTAAPVHIRSGSCPSQLLQVFP
GPERLERETETKSQEKGRHSMGGSQRLRSNKHRPNIIPASGNMSVFSRSISATTPTSASS
HEAMAAASVAIVTPRDKRVRSPVSPVVSERFRCITPYPPNSEYELELRIGDIVYVHKKRD
DGWYKGTLHRTGKTGLFPASFVESF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggaagaatggatgttgaatgacctgctggaatgctctgtatgcctagaacgtttagac
atttccagccgtgtcctgccctgccagcacacattttgcaagaaatgtttagaagaaatc
attaccacccagaaagaattaagatgtccggaatgcagagtccttgttacaacaaaactg
gaagacctaccacccaatgtactgctcatgaggattttggaagggatgaaaaacgttcct
agaacaaaacttgctggagatactccaatagcaatccaacctcagacacaagaaacctct
cacaatacaaacataccaattgcatgtgttcttcctcaacagcagcaacaacaacatccc
aagattcatcctgatgtacatgggaagatagaatctgcaccaaaaaactctgtatcccta
catcagccatgtgccaaagcattgtatgattacatgccccaagaaccaggagatctgggc
ttcaagaaaggtgacatcattattctaaagaagagagttgatgccaattggtaccatggt
gagaaaaatttaagccaaggtttcttcccagcctcttatgtccaagttctaacccctcta
cccaatgcaactgtaccccaatgcgttgcattgtacgatttcaagatgactgctgaagac
gaaaaagattgcctgacgtttaacaaaggggccgtggtgacggttattcgaagagttgat
gagaactgggctgaaggaagactcaccgaacgaattggtatatttcctatttcgtttgtc
gaaatgaacagcgccgctaagctactgatgaaaatatctacgaattttcaacctggacca
tcacgttcagctccagctttacccgtcacagacaatcttcaaaattcactgaacagtatg
acaaattcagtttcaacgtcttccccgtcaactaccccagcgactacgagttcagattcg
tccccatcaagcgtaacatcaagcgtaaatcgtgttgtaccgcgtgaaaagcgttttagt
ctaaacgtaaaccagcaaacacatccaactcagttcaaccgccgatctatagaaatatca
acccgccatcgaggtcttgcggttagctcatcggaaagcgaacttcagcctctggttccg
ggtgttagctcacctcctccgtctggtccaccatcatttatgactcccccggccctctat
attgccctgtatccatacaagcctcagaaagctgacgaattagaactccggaaaggtgct
ctgtataccgtcagtgaaaaatgccaagatggctggtttaaagggtccagcgttcgcaca
cagaagattggagttttccctggcaactacgttcaggttgtccggtcacagccacatcct
cagtctaatcctcctcctcccgcgccaattgctcctcaggttatgacgtctactcggtcc
aacattcaggctagtgtagtccatccgcctccaaaactccctccgcgagccttgagtcca
gctgcacagaatagcggttccgtcatgagtcctatattatcgtcacaaggctataaaccc
atgtcgaccatatctggaagtacatccagctcggcatcagttcctgcggcggtagttgca
cgattagctacaactcctgctcccgctccggcgctatctccgcgggccacaacgctaatc
agtccacctcccaatgtagccataggaggaggtggagtagcggttggagttgagccggcc
agcacaccaattcagccagaaaagaaagacaaagaaaaagcgagcgtcagtttgatgaaa
agattcacatgtcgtaagaaatcttcgcctccactacttcatccatactcgattgacaat
ccggtttttgaagatggttttaatacatctgtctccaagacaggtagtaatactccgact
gcagctccggtgcacattagatccgggtcgtgtccgagccagctgttgcaagtttttcca
ggcccggaacgcttagaacgcgaaacggaaaccaaatcacaggaaaaaggaaggcactca
atgggaggctcgcaacggctccgctctaacaaacaccgacccaacatcatccccgcttcg
ggcaacatgtcggtgttctctcgttccatttcagcgacgacccccactagcgcctcaagt
cacgaggcgatggctgcggcttccgttgcaattgtgacccctcgagacaagagagtgaga
agccccgtttcgcccgtcgtgagtgagaggtttcgctgcatcacgccgtatccacccaac
agcgagtatgagttggagctgcgtatcggtgacatagtttatgtgcacaaaaaaagagac
gatggctggtataagggaactttgcaccgcacagggaagacgggtttgtttcccgcatca
tttgttgaaagtttctga

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