Daphnia magna (water flea): 116929122
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Entry
116929122 CDS
T07514
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmk03041
]
116929122
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116929122
Spliceosome [BR:
dmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116929122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_2
KH_PNO1_2nd
KH-I_KHDC4-BBP
CMS1
MOEP19
GRP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
116929122
NCBI-ProteinID:
XP_032792169
LinkDB
All DBs
Position
LG8:complement(9712058..9715630)
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AA seq
823 aa
AA seq
DB search
MSDRRGYSRDGSRDSRHSSSTNYPQNYQSSHRSSHDSSRSNRWENSSRDYHHSEENSKKN
EHTPKTENSTVIRVSYDIVNCLSARGNAKVGELQDKSGAQIQVIHEDDNWVDVGVQISGQ
QEQIKLAEKMIKELNSSTSNSNTNSSTPYQSSSKGDGTSLDDWTFNAADSGMKKPKWENE
RQLDSERWQKPSFEPPRRQNHVESESRHPQPSANTLIVKVPSGSVGRIIGRGGAKINELQ
DQTGARIKILKDDDNGTEASIQITGDVEKQKEAERLIKELVSTSSFPGSGFSTNSAQPHT
VPDQSDVAFVDWGAVIRDSKEASIRRWANSPKICKNFYIEDPEVAVMSREEVEKFRLTHN
NITISHYKSDDTRPIPNPVMTFAQAFAHYPELLEAVQNQQFKDPSPIQCQAWPVLLKGHD
LIGIAQTGTGKTLAFLLPALIHIEGQPVTRSERQGPSVLIMAPTRELAQQIEREVAKFPW
KGIKCLCVYGGGDRRQQIGAVSAGVEIVVATPGRLYDLMQAGALKTSSVSYVVLDEADRM
LDLGFEPQIKKILIDVRPDRQIIMTSATWPEGIRRIANEYMDNPLQVCVGTLDLAACHSV
TQHVEILDEEDKRQRLLDFIRHLDPNDKAIVFVGRKLVADQVASELSLIGISCQCIHGDR
EQIDREQALADLRNGDVRLLIATDVASRGIDIKDITHILNYDFPRHAEEYVHRVGRTGRA
GRTGIAISFMTREDWSKASDLIDILKEANQEVPPELIRMAERFAAWKERKDEERQRNAAD
MGGGGGFRGRGGGGGRGGRRGDRDGGFGGGFGSRRGGFGRDFM
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagaagggggtatagccgtgatggatctcgagactcgagacacagtagttcc
acaaattatccccaaaattatcaaagttctcacaggagctcgcatgactctagccgtagc
aacagatgggaaaacagttcaagagattaccatcactcggaagaaaattctaagaaaaat
gagcatacccctaaaactgaaaactccactgtcattcgagtttcgtatgatattgtcaat
tgtctttctgcaagagggaatgccaaagttggtgaacttcaagataaatctggggcccaa
attcaggttattcatgaagatgacaactgggtggatgttggtgtacagatatctggtcaa
caagaacaaataaaacttgctgaaaaaatgatcaaagaactgaatagttcaacttctaac
agtaacactaattcttcaacaccataccaaagctctagcaaaggtgatggtacttccctt
gatgattggactttcaatgctgccgattcagggatgaagaaacctaaatgggaaaatgag
agacagttagattcagaaagatggcagaaaccatctttcgaaccgcctagacggcaaaat
catgttgaatcagagagtcggcacccacagccgtctgcaaatacattaattgtaaaagtg
ccttctggatctgttggacggatcattggccgtggtggagccaagattaatgaactgcaa
gatcaaactggagcaagaatcaagattctcaaggatgacgataatggaacggaagcgagc
attcaaattactggcgacgttgagaagcaaaaagaagccgaacgtttaataaaagaactt
gtatcaactagtagctttcccggttctggattttccaccaattctgctcagccgcatact
gtaccagaccaatccgatgttgcatttgtggattggggtgccgtcatcagggattcaaaa
gaagcctcaatacgacgttgggccaacagtccaaaaatttgcaaaaatttctacatagag
gaccctgaagtggcagtcatgtcccgtgaagaggtcgagaaatttcggttaactcataat
aacattacaatctcccactacaaatcagatgatactcggccgatcccgaatccggtgatg
actttcgctcaagcatttgcacactatcctgaattattagaagccgttcaaaaccaacag
tttaaagacccttcaccaattcagtgccaagcttggccggttcttcttaaaggtcatgat
ctcattggcattgcacaaactggtacagggaaaaccttagcatttcttcttccggccctg
attcacattgaagggcaacccgtgacccgtagtgagcgtcaaggaccaagtgttctcatt
atggcaccgactcgtgaacttgctcagcaaatcgagagggaagtagcaaaattcccttgg
aaaggtatcaaatgtttatgcgtttacggtggcggtgacagacgtcaacagatcggcgcc
gtgtctgcgggtgttgagatagtagttgcaactccaggccgactctacgatcttatgcaa
gctggtgctctcaaaaccagctcagtctcatatgtcgtgttggacgaagccgatagaatg
cttgatttgggttttgaaccgcaaatcaaaaagattctcattgacgtccgacccgaccgg
cagatcataatgactagtgcaacctggcccgaaggcatccggcgaattgcaaatgaatac
atggacaaccctctccaagtgtgcgttggaactttagacttggctgcatgccactcagtc
acccagcacgtagagatattggatgaggaagacaagcgccaacggctgttggattttatt
cgtcatcttgaccctaatgataaggctattgtctttgtgggtcgtaagttggtcgcagat
caagtggccagtgaattaagtttaattggcatcagttgccaatgcatccatggcgatcgc
gagcagatagacagagagcaggcgttagctgatctgcgaaatggtgacgtgagattgctg
attgctacagatgtagcttcacgaggcattgatataaaagacattacgcatattctcaac
tatgatttcccccgccatgcggaagaatatgtccatcgagtcggtaggacaggcagagca
ggaagaactggaatagcaatttctttcatgaccagggaagattggtctaaggctagcgat
cttatagatatattgaaagaagcaaatcaagaagtacctcccgagctgattagaatggca
gaaaggttcgctgcgtggaaggaaagaaaagacgaagaaagacagagaaatgctgccgac
atgggcggtggaggtggatttcgtggtcgaggaggtggaggaggtcgtggaggtcgtcgt
ggcgatcgagacggtggatttggtggtggatttggttctagacgaggaggttttggtcgg
gatttcatgtga
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