Daphnia magna (water flea): 116929255
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Entry
116929255 CDS
T07514
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dmk
Daphnia magna (water flea)
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmk03009
]
116929255
Enzymes [BR:
dmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116929255
Ribosome biogenesis [BR:
dmk03009
]
Eukaryotic type
Pre-60S particles
Helicases
116929255
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GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116929255
NCBI-ProteinID:
XP_032792322
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All DBs
Position
LG8:1643073..1646157
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AA seq
592 aa
AA seq
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MKTEWNDLGVKLSEPILQTLKDLNFIKTTPVQAACIPLLLQKKDVCAEAVTGSGKTLAFI
IPILEILLARSTPLKKHDIGALIISPTRELASQIDEVLSKFLEHLPQFTHLQMIGGAHTV
VQDIKEFTSKGAHIIITTPGRFMDLLIRQGDKINLAGGLKALEILILDEADRLLDLGFHA
TLNTILGFLPKQRRTGLFSATQTREVESLARAGLRNPVAVTVKEKNLGGDGSRTPSSLAN
YYMVCEGNQKLAALISLMKTKAPGKFMVFMSTCAAVEYFSLLLKNFLPSVTVMSIHGKLK
TTRFKIFDKFRSLKTTGLLVCTDVMARGIDIADIDWVFQFDAPSCASDFVHRCGRTARIG
NHGTALAFLLPNEEPYVHFIDINQKVKLTPMELPDDLPDNLDEIRQMQLNDRSLMDRATR
AFVSYIHSYVKHECSVLLRVKDLDFGRLAVGFGLLTLPKMPELKNRKTDFFKPLDIDLNT
IAYKEKAREKIRQEKLTIYRETGVWPSSKANSGPMKKNESWSEQRAQKNRKKEKKKLRVE
QKKRKRAAVDEDEWNELARDARLLKKLKKRKISEKSFEKQFNKADAAPSETT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagagtggaatgacttgggtgttaaactcagcgaaccaatccttcagacattg
aaagacctcaacttcataaagacaacccccgttcaagctgcatgtatacctctattgcta
cagaagaaagatgtgtgtgctgaagcagttacaggttcaggaaaaacgctggcattcatc
attcccatcctagaaattttacttgcacgatctacaccattgaaaaaacatgatattggt
gctctcattatatccccaacaagagaattggcatcacaaattgatgaagtgttatccaag
tttttggaacacctccctcagttcacacaccttcaaatgattggtggtgcacatactgtt
gttcaggatatcaaagaatttaccagcaaaggtgctcacattattatcactacacctgga
cgattcatggacctactcattcgccagggggacaagattaaccttgccggaggcctaaaa
gcactggaaattctcatattagatgaagcagaccgtcttctggacttgggattccatgct
accctcaatacaattttggggtttcttccaaagcaaagacggacaggtcttttttctgcc
acccagactcgtgaagttgagtctttagctagagctggattgaggaatccagtggcagtc
acagtgaaagagaagaatttaggtggtgatggttcaagaacaccatcttctctggctaat
tactacatggtgtgcgaaggaaatcagaaattggctgccttaatttctctcatgaaaact
aaagctccaggcaaatttatggttttcatgtcaacttgtgctgctgttgaatatttttct
ctgcttctaaaaaactttttgccatctgttacggtgatgagcatacacgggaaactgaaa
acgacccgcttcaaaatatttgacaagtttcggagccttaaaacaactggtcttttggtt
tgcactgacgttatggcccgcggtatcgatattgcagacattgattgggtattccagttc
gacgcaccttcgtgcgcctcagacttcgtacaccgctgtggacggactgcccgtatcggt
aatcatggaacagcgctagcctttctcctacccaatgaagagccttacgtccactttatt
gacatcaatcaaaaagtgaagttgacccctatggaattacccgatgatctacccgacaac
ttggacgaaattcgacaaatgcagctgaacgatcgctcattgatggacagggccactcga
gcatttgtttcttacatacactcgtacgtcaaacacgaatgctcagttctacttcgagtc
aaagatttagatttcggtcgcttggccgtgggtttcgggcttctgacattgccaaaaatg
ccagagctgaaaaataggaaaacggactttttcaagccacttgatattgatctcaacacc
attgcatacaaggagaaggctcgggaaaagataagacaagagaaattaaccatctatcgt
gagacgggagtttggccgtcatcgaaagccaattcgggcccgatgaagaaaaacgagtct
tggtcagaacagagggctcaaaagaatcgcaagaaggaaaagaagaagctcagagtggag
cagaagaaacgtaaacgtgcagccgtagacgaagacgagtggaacgagctcgcccgagac
gctcgactgctcaagaaattgaaaaagcgaaagatttcggaaaagtcgttcgagaaacag
ttcaataaggcggatgctgcaccctccgagactacatga
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